RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 RPL36A-HNRNPH2H7BZ11 118 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 I3L521 148 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 CST8O60676 142 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 HTR1AP08908 422 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 COX4I1P13073 169 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 ATP6V0CP27449 155 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 LPAR6P43657 344 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 RAB13P51153 203 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 OR8G1Q15617 311 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 SCGB2B2Q4G0G5 96 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 MRPL51Q4U2R6 128 aaKnown RBP2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 PRSS54Q6PEW0 395 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 AGTRAPQ6RW13 159 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 HRCT1Q6UXD1 115 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 SSX8Q7RTT4 187 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 ANGPTL5Q86XS5 388 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 MIR7-3HGQ8N6C7 128 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 DNAJC9Q8WXX5 260 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 H1FXQ92522 213 aaKnown RBP2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 COPZ2Q9P299 210 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 MARCOQ9UEW3 520 aaPredicted RBP2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 HSPB8Q9UJY1 196 aa2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 RPRD2Q5VT52 1461 aaKnown RBP2.11□□□□□ -2.07
SMARCA1-204ENST00000478420 REREQ9P2R6 1566 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 SVILO95425 2214 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 BRWD3Q6RI45 1802 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 DOCK8Q8NF50 2099 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 A0A087WUU8 490 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 DUXBA0A1W2PPF3 345 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 TMEM189A5PLL7 270 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 A6NED7 52 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 LEUTXA8MZ59 168 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 MIF4GDA9UHW6 222 aaKnown RBP2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 LECT2O14960 151 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 ZNF73O43830 326 aaPredicted RBP2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 LHBP01229 141 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 APOC1P02654 83 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 IL4P05112 153 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 UBBP0CG47 229 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST1H2BOP23527 126 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 SDC4P31431 198 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST1H2BBP33778 126 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 ZNF80P51504 273 aaPredicted RBP2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST1H2BDP58876 126 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST1H2BCP62807 126 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 ZNF816Q0VGE8 651 aaPredicted RBP2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST2H2BEQ16778 126 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 KPRPQ5T749 579 aaPredicted RBP2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 SPATA12Q7Z6I5 190 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 OR5C1Q8NGR4 320 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 OR13C4Q8NGS5 318 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 ACOT12Q8WYK0 555 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST1H2BHQ93079 126 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 C2orf50Q96LR7 162 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST1H2BNQ99877 126 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 HIST1H2BMQ99879 126 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 RNF5Q99942 180 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 VPS25Q9BRG1 176 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 OR2J1Q9GZK6 312 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 IMUPQ9GZP8 106 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 TMEM126AQ9H061 195 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 C11orf1Q9H5F2 150 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 PCTPQ9UKL6 214 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 TRAPPC2LQ9UL33 140 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 FUT9Q9Y231 359 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 MED31Q9Y3C7 131 aa2.1□□□□□ -2.07
SMARCA1-204ENST00000478420 DOCK5Q9H7D0 1870 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 BCL9O00512 1426 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 FMN1Q68DA7 1419 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 WDR7Q9Y4E6 1490 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 SCN10AQ9Y5Y9 1956 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 IGKV1OR2-108A0A075B7D4 117 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 BORCS7-ASMTA0A0B4J1R7 106 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 A8MUU9 505 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 C5orf58C9J3I9 102 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 H3BMM0 161 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 BUB1B-PAK6H3BSN5 160 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 SULT1C4O75897 302 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 FAM107AO95990 144 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 MPC1LP0DKB6 136 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 OGNP20774 298 aaKnown RBP2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 NPPCP23582 126 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 EVX1P49640 407 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 INSL3P51460 131 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 TSPEAR-AS2P59090 65 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 DNAJB13P59910 316 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 RPL30P62888 115 aaKnown RBP2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 CCL20P78556 96 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 PSG9Q00887 426 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 DNLZQ5SXM8 178 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 C10orf91Q5T1B1 145 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 FKBP1CQ5VVH2 108 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 AMTNQ6UX39 209 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 C16orf47Q6ZP98 133 aaPredicted RBP2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 LCA10Q71F78 164 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 LHFPL1Q86WI0 220 aa2.09□□□□□ -2.07
SMARCA1-204ENST00000478420 SPANXA2-OT1Q8N9U9 137 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms