RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ZNF502Q8TBZ5 544 aa17.3■□□□□ 0.36
TRAF4-211ENST00000478021 GPR132Q9UNW8 380 aa17.3■□□□□ 0.36
TRAF4-211ENST00000478021 CLEC3BP05452 202 aa17.29■□□□□ 0.36
TRAF4-211ENST00000478021 GPR183P32249 361 aa17.29■□□□□ 0.36
TRAF4-211ENST00000478021 ZNF79Q15937 498 aa17.29■□□□□ 0.36
TRAF4-211ENST00000478021 CCDC190Q86UF4 302 aa17.29■□□□□ 0.36
TRAF4-211ENST00000478021 NAA60Q9H7X0 242 aa17.29■□□□□ 0.36
TRAF4-211ENST00000478021 SLC2A8Q9NY64 477 aa17.29■□□□□ 0.36
TRAF4-211ENST00000478021 A0A0G2JRQ6 117 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 ATG12O94817 140 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 P0C879 139 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 HSPE1P61604 102 aaKnown RBP17.28■□□□□ 0.36
TRAF4-211ENST00000478021 PRCDQ00LT1 54 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 C11orf87Q6NUJ2 197 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 Q8N402 240 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 RNASE11Q8TAA1 199 aaKnown RBP17.28■□□□□ 0.36
TRAF4-211ENST00000478021 TRIM63Q969Q1 353 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 TMEM222Q9H0R3 208 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 SCP2D1Q9UJQ7 156 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 SMAD5-AS1Q9Y6J3 95 aa17.28■□□□□ 0.36
TRAF4-211ENST00000478021 A0A0B4J293 547 aa17.27■□□□□ 0.36
TRAF4-211ENST00000478021 CRYM-AS1A6NIL9 109 aa17.27■□□□□ 0.36
TRAF4-211ENST00000478021 KLF9Q13886 244 aaPredicted RBP17.27■□□□□ 0.36
TRAF4-211ENST00000478021 ADAMTSL5Q6ZMM2 481 aa17.27■□□□□ 0.36
TRAF4-211ENST00000478021 LHFPL5Q8TAF8 219 aa17.27■□□□□ 0.36
TRAF4-211ENST00000478021 VN1R17PQ8TDU5 208 aa17.27■□□□□ 0.36
TRAF4-211ENST00000478021 SIGLEC8Q9NYZ4 499 aa17.27■□□□□ 0.36
TRAF4-211ENST00000478021 IGHV3-35A0A0C4DH35 117 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 ZNF320A2RRD8 509 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 IZUMO1RA6ND01 250 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 C2orf70A6NJV1 201 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 B3GALNT1O75752 331 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 GPHB5Q86YW7 130 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 OR2C3Q8N628 320 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 GLYATL2Q8WU03 294 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 RRNAD1Q96FB5 475 aaKnown RBP17.26■□□□□ 0.35
TRAF4-211ENST00000478021 ASCL2Q99929 193 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 PLEKHA3Q9HB20 300 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 SELENOKQ9Y6D0 94 aa17.26■□□□□ 0.35
TRAF4-211ENST00000478021 LGALS9O00182 355 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 ST8SIA3O43173 380 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 PLET1Q6UQ28 207 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 TOMM5Q8N4H5 51 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 DYNLRB2Q8TF09 96 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 CACNG8Q8WXS5 425 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 TMEM230Q96A57 120 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 MISP3Q96FF7 219 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 PRR13Q9NZ81 148 aa17.25■□□□□ 0.35
TRAF4-211ENST00000478021 OR2T8A6NH00 312 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 K7EIM0 57 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 CDS2O95674 445 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 IFNA17P01571 189 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 FOLR2P14207 255 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 DHODHQ02127 395 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 FAM106AQ4KMX7 169 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 SELENOHQ8IZQ5 122 aaKnown RBP17.24■□□□□ 0.35
TRAF4-211ENST00000478021 SLC35G3Q8N808 338 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 UBAC2Q8NBM4 344 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 OR1L6Q8NGR2 347 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 OR1P1Q8NH06 330 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 SCARB1Q8WTV0 552 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 C21orf62Q9NYP8 219 aa17.24■□□□□ 0.35
TRAF4-211ENST00000478021 TGOLN2O43493 480 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 FAUP35544 74 aaKnown RBP17.23■□□□□ 0.35
TRAF4-211ENST00000478021 AP3S2P59780 193 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 SPANXN2Q5MJ10 180 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 TMEM268Q5VZI3 342 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 LCN12Q6JVE5 192 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 UNQ9165/PRO28630Q6UXU0 137 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 Q6ZRM9 215 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 SGPP2Q8IWX5 399 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 RBPMSQ93062 196 aaKnown RBP17.23■□□□□ 0.35
TRAF4-211ENST00000478021 PDCD10Q9BUL8 212 aa17.23■□□□□ 0.35
TRAF4-211ENST00000478021 AKR1C4P17516 323 aa17.22■□□□□ 0.35
TRAF4-211ENST00000478021 ETV6P41212 452 aa17.22■□□□□ 0.35
TRAF4-211ENST00000478021 ERHP84090 104 aaKnown RBP17.22■□□□□ 0.35
TRAF4-211ENST00000478021 CD300EQ496F6 205 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-211ENST00000478021 ZNF114Q8NC26 417 aa17.22■□□□□ 0.35
TRAF4-211ENST00000478021 SCGB3A2Q96PL1 93 aa17.22■□□□□ 0.35
TRAF4-211ENST00000478021 TMEM213A2RRL7 107 aa17.21■□□□□ 0.35
TRAF4-211ENST00000478021 F8W735 103 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-211ENST00000478021 HOXA1P49639 335 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-211ENST00000478021 Q56UQ5 140 aa17.21■□□□□ 0.35
TRAF4-211ENST00000478021 Q8N1Y9 231 aa17.21■□□□□ 0.35
TRAF4-211ENST00000478021 CHRDL1Q9BU40 450 aa17.21■□□□□ 0.35
TRAF4-211ENST00000478021 SRRQ9GZT4 340 aa17.21■□□□□ 0.35
TRAF4-211ENST00000478021 A8MWP6 167 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 MT-CO2P00403 227 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 IGHV3-48P01763 117 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 CBLN1P23435 193 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 TMEM187Q14656 261 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 DEFB114Q30KQ6 69 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 TM4SF20Q53R12 229 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 ZNF57Q68EA5 555 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-211ENST00000478021 FAM219AQ8IW50 185 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 OR2K2Q8NGT1 345 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 PINX1Q96BK5 328 aaKnown RBP17.2■□□□□ 0.34
TRAF4-211ENST00000478021 GPR146Q96CH1 333 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 BSCL2Q96G97 398 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-211ENST00000478021 CACNG5Q9UF02 275 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms