RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 IGHV3-74A0A0B4J1X5 117 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 TRAV2A0A0B4J234 112 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 IFITM5A6NNB3 132 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 YIF1AO95070 293 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 HPRT1P00492 218 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 OR10A3P58181 314 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 SOHLH1Q5JUK2 328 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 HACD4Q5VWC8 232 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 TRPT1Q86TN4 253 aaKnown RBP14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 FAM24BQ8N5W8 94 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 MAPKAPK5-AS1Q8N8E1 139 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 LSM10Q969L4 123 aaKnown RBP14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 MS4A6AQ9H2W1 248 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 CCL28Q9NRJ3 127 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 ANXA10Q9UJ72 324 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 SULT1C2O00338 296 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 CD74P04233 296 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 SPP1P10451 314 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 C4BPBP20851 252 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 C12orf74Q32Q52 190 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 CDNFQ49AH0 187 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 MORN3Q6PF18 240 aaPredicted RBP14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 DMBX1Q8NFW5 382 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 OR1L8Q8NGR8 309 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 NUDCD2Q8WVJ2 157 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 SECTM1Q8WVN6 248 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 GIMAP1Q8WWP7 306 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 NDUFA4L2Q9NRX3 87 aa14.58□□□□□ -0.08
PDLIM1-202ENST00000477757 TEX50A0A1B0GTY4 177 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 PTGES3LE9PB15 166 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 HSMCR30P0CW71 290 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 CATR1Q13166 79 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 ZBTB34Q8NCN2 500 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 OR13F1Q8NGS4 319 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 SCRT1Q9BWW7 348 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 ATG5Q9H1Y0 275 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 VSIRQ9H7M9 311 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 PLEKHA2Q9HB19 425 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 COMMD9Q9P000 198 aa14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 APOBP04114 4563 aaKnown RBP14.57□□□□□ -0.08
PDLIM1-202ENST00000477757 IGLV2-18A0A075B6J9 118 aa14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 DNASE2O00115 360 aaPredicted RBP14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 PDCD5O14737 125 aa14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 Q6ZRM9 215 aa14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 ZNF767PQ75MW2 155 aa14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 ST8SIA2Q92186 375 aa14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 NXF2Q9GZY0 626 aaKnown RBP14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 ACOT13Q9NPJ3 140 aa14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 TBC1D24Q9ULP9 559 aa14.56□□□□□ -0.08
PDLIM1-202ENST00000477757 TMEM235A6NFC5 223 aa14.55□□□□□ -0.08
PDLIM1-202ENST00000477757 IFNA10P01566 189 aa14.55□□□□□ -0.08
PDLIM1-202ENST00000477757 EIF4EP06730 217 aaKnown RBP14.55□□□□□ -0.08
PDLIM1-202ENST00000477757 MLLT11Q13015 90 aaPredicted RBP14.55□□□□□ -0.08
PDLIM1-202ENST00000477757 GINS3Q9BRX5 216 aa14.55□□□□□ -0.08
PDLIM1-202ENST00000477757 HINT2Q9BX68 163 aa14.55□□□□□ -0.08
PDLIM1-202ENST00000477757 TRAV1-2A0A0B4J238 106 aa14.54□□□□□ -0.08
PDLIM1-202ENST00000477757 ST8SIA3O43173 380 aa14.54□□□□□ -0.08
PDLIM1-202ENST00000477757 SSX5O60225 188 aa14.54□□□□□ -0.08
PDLIM1-202ENST00000477757 UBE2DNLQ8IWF7 75 aa14.54□□□□□ -0.08
PDLIM1-202ENST00000477757 LILRB2Q8N423 598 aa14.54□□□□□ -0.08
PDLIM1-202ENST00000477757 CSNK1G2-AS1Q8NCQ2 148 aa14.54□□□□□ -0.08
PDLIM1-202ENST00000477757 TXN2Q99757 166 aa14.54□□□□□ -0.08
PDLIM1-202ENST00000477757 TMEM14BQ9NUH8 114 aa14.54□□□□□ -0.08
PDLIM1-202ENST00000477757 MARCH11A6NNE9 402 aa14.53□□□□□ -0.08
PDLIM1-202ENST00000477757 C16orf90A8MZG2 172 aa14.53□□□□□ -0.08
PDLIM1-202ENST00000477757 PPYP01298 95 aa14.53□□□□□ -0.08
PDLIM1-202ENST00000477757 FCGR2CP31995 323 aa14.53□□□□□ -0.08
PDLIM1-202ENST00000477757 GNG2P59768 71 aa14.53□□□□□ -0.08
PDLIM1-202ENST00000477757 ERVK-16P61578 105 aa14.53□□□□□ -0.08
PDLIM1-202ENST00000477757 OR1P1Q8NH06 330 aa14.53□□□□□ -0.08
PDLIM1-202ENST00000477757 OR51H1Q8NH63 302 aa14.53□□□□□ -0.08
PDLIM1-202ENST00000477757 I3L2K1 104 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 IFNA21P01568 189 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 IFNA17P01571 189 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 APOHP02749 345 aaPredicted RBP14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 MFAP4P55083 255 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 C1orf134Q5TEV5 83 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 DUSP18Q8NEJ0 188 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 SLC25A46Q96AG3 418 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 SLC5A7Q9GZV3 580 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 CLEC5AQ9NY25 188 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 RABAC1Q9UI14 185 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 OR51B2Q9Y5P1 312 aa14.52□□□□□ -0.09
PDLIM1-202ENST00000477757 DNAH5Q8TE73 4624 aa14.51□□□□□ -0.09
PDLIM1-202ENST00000477757 ARPC4P59998 168 aa14.51□□□□□ -0.09
PDLIM1-202ENST00000477757 RPL11P62913 178 aaKnown RBP14.51□□□□□ -0.09
PDLIM1-202ENST00000477757 TOMM20LQ6UXN7 152 aa14.51□□□□□ -0.09
PDLIM1-202ENST00000477757 GRAMD2BQ96HH9 432 aa14.51□□□□□ -0.09
PDLIM1-202ENST00000477757 SCN3BQ9NY72 215 aa14.51□□□□□ -0.09
PDLIM1-202ENST00000477757 AGRNO00468 2067 aa14.51□□□□□ -0.09
PDLIM1-202ENST00000477757 IGHV3-66A0A0C4DH42 116 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 KNCNA6PVL3 124 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 RAB3BP20337 219 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 AADACL3Q5VUY0 350 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 UBE2UQ5VVX9 321 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 ZNF818PQ6ZRF7 136 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 CADM3Q8N126 398 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 Q8N1X5 172 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 MISP3Q96FF7 219 aa14.5□□□□□ -0.09
PDLIM1-202ENST00000477757 TMEM56Q96MV1 263 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms