RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 C2orf83Q53S99 150 aa22.9■■□□□ 1.26
VEGFA-211ENST00000476772 HSD17B11Q8NBQ5 300 aa22.9■■□□□ 1.26
VEGFA-211ENST00000476772 RBM14Q96PK6 669 aaKnown RBP22.9■■□□□ 1.26
VEGFA-211ENST00000476772 ZFHX3Q15911 3703 aa22.9■■□□□ 1.26
VEGFA-211ENST00000476772 AREGP15514 252 aa22.89■■□□□ 1.25
VEGFA-211ENST00000476772 CX3CL1P78423 397 aa22.89■■□□□ 1.25
VEGFA-211ENST00000476772 TUSC1Q2TAM9 212 aa22.89■■□□□ 1.25
VEGFA-211ENST00000476772 TMED6Q8WW62 240 aa22.89■■□□□ 1.25
VEGFA-211ENST00000476772 SSMEM1Q8WWF3 244 aa22.89■■□□□ 1.25
VEGFA-211ENST00000476772 RASL11BQ9BPW5 248 aa22.89■■□□□ 1.25
VEGFA-211ENST00000476772 GINS3Q9BRX5 216 aa22.89■■□□□ 1.25
VEGFA-211ENST00000476772 FLNAP21333 2647 aaKnown RBP22.88■■□□□ 1.25
VEGFA-211ENST00000476772 LY6EQ16553 131 aa22.88■■□□□ 1.25
VEGFA-211ENST00000476772 ATP6V1FQ16864 119 aa22.88■■□□□ 1.25
VEGFA-211ENST00000476772 FAM74A1Q5RGS3 127 aa22.88■■□□□ 1.25
VEGFA-211ENST00000476772 ZNF562Q6V9R5 426 aa22.88■■□□□ 1.25
VEGFA-211ENST00000476772 C9orf139Q6ZV77 190 aa22.88■■□□□ 1.25
VEGFA-211ENST00000476772 MRPL41Q8IXM3 137 aaKnown RBP22.88■■□□□ 1.25
VEGFA-211ENST00000476772 AANATQ16613 207 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 FAM103A1Q9BTL3 118 aaKnown RBP22.87■■□□□ 1.25
VEGFA-211ENST00000476772 TMEM147Q9BVK8 224 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 MOB4Q9Y3A3 225 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 NAV3Q8IVL0 2385 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 UBE2L5PA0A1B0GUS4 154 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 FBXO24O75426 580 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 IFNA5P01569 189 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 HLA-DRB1P01911 266 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 ATP5IP56385 69 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-211ENST00000476772 NDPQ00604 133 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 C5orf56Q8N8D9 126 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 P2RX4Q99571 388 aa22.87■■□□□ 1.25
VEGFA-211ENST00000476772 A6NDX4 124 aa22.86■■□□□ 1.25
VEGFA-211ENST00000476772 CD5LO43866 347 aa22.86■■□□□ 1.25
VEGFA-211ENST00000476772 SLC25A24Q6NUK1 477 aa22.86■■□□□ 1.25
VEGFA-211ENST00000476772 ABHD5Q8WTS1 349 aa22.86■■□□□ 1.25
VEGFA-211ENST00000476772 ARPC1AQ92747 370 aa22.86■■□□□ 1.25
VEGFA-211ENST00000476772 SH3BGRL3Q9H299 93 aa22.86■■□□□ 1.25
VEGFA-211ENST00000476772 UQCC1Q9NVA1 299 aa22.86■■□□□ 1.25
VEGFA-211ENST00000476772 TEX15Q9BXT5 2789 aa22.85■■□□□ 1.25
VEGFA-211ENST00000476772 IGHV7-81A0A0B4J1V7 117 aa22.85■■□□□ 1.25
VEGFA-211ENST00000476772 SRSF8Q9BRL6 282 aaKnown RBP22.85■■□□□ 1.25
VEGFA-211ENST00000476772 ATP6V0CP27449 155 aa22.84■■□□□ 1.25
VEGFA-211ENST00000476772 VWC2Q2TAL6 325 aa22.84■■□□□ 1.25
VEGFA-211ENST00000476772 C19orf35Q6ZS72 473 aa22.84■■□□□ 1.25
VEGFA-211ENST00000476772 HSD17B13Q7Z5P4 300 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-211ENST00000476772 PCNPQ8WW12 178 aaKnown RBP22.84■■□□□ 1.25
VEGFA-211ENST00000476772 HSPB9Q9BQS6 159 aa22.84■■□□□ 1.25
VEGFA-211ENST00000476772 SUB1P53999 127 aaKnown RBP eCLIP22.84■■□□□ 1.25
VEGFA-211ENST00000476772 RUNX1Q01196 453 aa22.84■■□□□ 1.25
VEGFA-211ENST00000476772 IL17RELQ6ZVW7 336 aa22.84■■□□□ 1.25
VEGFA-211ENST00000476772 ZNF114Q8NC26 417 aa22.84■■□□□ 1.25
VEGFA-211ENST00000476772 SLC25A32Q9H2D1 315 aa22.84■■□□□ 1.25
VEGFA-211ENST00000476772 SH2D7A6NKC9 451 aaPredicted RBP22.83■■□□□ 1.24
VEGFA-211ENST00000476772 SPP1P10451 314 aa22.83■■□□□ 1.24
VEGFA-211ENST00000476772 DLK1P80370 383 aa22.83■■□□□ 1.24
VEGFA-211ENST00000476772 GGACTQ9BVM4 153 aa22.83■■□□□ 1.24
VEGFA-211ENST00000476772 WDR61Q9GZS3 305 aaKnown RBP22.83■■□□□ 1.24
VEGFA-211ENST00000476772 RFNGQ9Y644 331 aa22.83■■□□□ 1.24
VEGFA-211ENST00000476772 FGF16O43320 207 aa22.82■■□□□ 1.24
VEGFA-211ENST00000476772 EIF5AL1Q6IS14 154 aaKnown RBP22.82■■□□□ 1.24
VEGFA-211ENST00000476772 SCGB1C1Q8TD33 95 aa22.82■■□□□ 1.24
VEGFA-211ENST00000476772 PARD6GQ9BYG4 376 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-211ENST00000476772 PITPNC1Q9UKF7 332 aa22.82■■□□□ 1.24
VEGFA-211ENST00000476772 FBXO7Q9Y3I1 522 aa22.82■■□□□ 1.24
VEGFA-211ENST00000476772 IGHV4-59P01825 116 aa22.81■■□□□ 1.24
VEGFA-211ENST00000476772 AMY1AP04745 511 aa22.81■■□□□ 1.24
VEGFA-211ENST00000476772 ZNF48Q96MX3 618 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-211ENST00000476772 PLA2G2EQ9NZK7 142 aa22.81■■□□□ 1.24
VEGFA-211ENST00000476772 RPS10-NUDT3A0A1W2PQS6 291 aa22.81■■□□□ 1.24
VEGFA-211ENST00000476772 SMCO3A2RU48 225 aa22.81■■□□□ 1.24
VEGFA-211ENST00000476772 SEC11BP0C7V7 166 aa22.81■■□□□ 1.24
VEGFA-211ENST00000476772 ARSJQ5FYB0 599 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-211ENST00000476772 SPNS3Q6ZMD2 512 aa22.81■■□□□ 1.24
VEGFA-211ENST00000476772 MFAP2P55001 183 aa22.8■■□□□ 1.24
VEGFA-211ENST00000476772 ASPHD1Q5U4P2 390 aa22.8■■□□□ 1.24
VEGFA-211ENST00000476772 TEX29Q8N6K0 151 aa22.8■■□□□ 1.24
VEGFA-211ENST00000476772 TAF15Q92804 592 aaKnown RBP eCLIP22.8■■□□□ 1.24
VEGFA-211ENST00000476772 RSG1Q9BU20 258 aa22.8■■□□□ 1.24
VEGFA-211ENST00000476772 F11RQ9Y624 299 aaKnown RBP22.8■■□□□ 1.24
VEGFA-211ENST00000476772 MYO9AB2RTY4 2548 aa22.79■■□□□ 1.24
VEGFA-211ENST00000476772 EGR2P11161 476 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-211ENST00000476772 IER3P46695 156 aa22.79■■□□□ 1.24
VEGFA-211ENST00000476772 PVRIGQ6DKI7 326 aa22.79■■□□□ 1.24
VEGFA-211ENST00000476772 OR1P1Q8NH06 330 aa22.79■■□□□ 1.24
VEGFA-211ENST00000476772 GNPNAT1Q96EK6 184 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-211ENST00000476772 YAE1D1Q9NRH1 226 aa22.79■■□□□ 1.24
VEGFA-211ENST00000476772 CTRB1P17538 263 aa22.78■■□□□ 1.24
VEGFA-211ENST00000476772 FGF7P21781 194 aa22.78■■□□□ 1.24
VEGFA-211ENST00000476772 CTRB2Q6GPI1 263 aa22.78■■□□□ 1.24
VEGFA-211ENST00000476772 RNASEH2CQ8TDP1 164 aaKnown RBP22.78■■□□□ 1.24
VEGFA-211ENST00000476772 PARP11Q9NR21 331 aa22.78■■□□□ 1.24
VEGFA-211ENST00000476772 MDKP21741 143 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-211ENST00000476772 RAB14P61106 215 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 CD69Q07108 199 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 MLANAQ16655 118 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 CLLU1Q5K131 121 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 Q6YL49 198 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 WDR83OSQ9Y284 106 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 TREML4Q6UXN2 200 aa22.77■■□□□ 1.24
VEGFA-211ENST00000476772 OR2G3Q8NGZ4 309 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms