RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 GRINAQ7Z429 371 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 ADM2Q7Z4H4 148 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 DAND5Q8N907 189 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF439Q8NDP4 499 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 OR11H1Q8NG94 326 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 OR10K1Q8NGX5 313 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 OR11H2Q8NH07 326 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF721Q8TF20 911 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 C1QTNF6Q9BXI9 259 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 NKX6-2Q9C056 277 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-207ENST00000476169 TAAR3PQ9P1P4 343 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 SLX4Q8IY92 1834 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 TAF1LQ8IZX4 1826 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 NUP214P35658 2090 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-207ENST00000476169 ANKRD12Q6UB98 2062 aa2.67□□□□□ -1.98
VPS13D-207ENST00000476169 N4BP2Q86UW6 1770 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-207ENST00000476169 WDR90Q96KV7 1748 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 TRBV20OR9-2A0A075B6H5 130 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 A0A1W2PQ67 120 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 VPS37CA5D8V6 355 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-207ENST00000476169 A8MUN3 132 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 H3BMM0 161 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-207ENST00000476169 NDUFC2O95298 119 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 IGLV7-43P04211 117 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 C8GP07360 202 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 CYBAP13498 195 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 MDKP21741 143 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-207ENST00000476169 PHBP35232 272 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 RAB13P51153 203 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 RHOBP62745 196 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 RPL30P62888 115 aaKnown RBP2.66□□□□□ -1.98
VPS13D-207ENST00000476169 ZNF816Q0VGE8 651 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-207ENST00000476169 LGALSLQ3ZCW2 172 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-207ENST00000476169 TNFAIP8L3Q5GJ75 292 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 SLC25A34Q6PIV7 304 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 SMARCD3Q6STE5 483 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 OR10A6Q8NH74 314 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 SGMS2Q8NHU3 365 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 UBE2WQ96B02 151 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 TSPAN32Q96QS1 320 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 MGLLQ99685 303 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 WDR61Q9GZS3 305 aaKnown RBP2.66□□□□□ -1.98
VPS13D-207ENST00000476169 MED29Q9NX70 200 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 SNX12Q9UMY4 172 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 SSR3Q9UNL2 185 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 SLC35A3Q9Y2D2 325 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 TMEM56-RWDD3S4R434 201 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 U3KQK5 164 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 NOTCH3Q9UM47 2321 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 LAMB4A4D0S4 1761 aa2.66□□□□□ -1.98
VPS13D-207ENST00000476169 KIF13BQ9NQT8 1826 aa2.65□□□□□ -1.98
VPS13D-207ENST00000476169 UTRNP46939 3433 aa2.65□□□□□ -1.98
VPS13D-207ENST00000476169 NAV1Q8NEY1 1877 aa2.65□□□□□ -1.98
VPS13D-207ENST00000476169 ADAMTSL1Q8N6G6 1762 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 TRBV24-1A0A075B6N3 115 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 A0A0D9SFI3 127 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 A0A0J9YY10 115 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 TMEM269A0A1B0GVZ9 245 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 A0A1B0GX78 115 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 I3L521 148 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 PFDN1O60925 122 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 RBP1P09455 135 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF140P52738 457 aaPredicted RBP2.65□□□□□ -1.99
VPS13D-207ENST00000476169 NCALDP61601 193 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 TBPL1P62380 186 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 HBA1P69905 142 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 RHEBQ15382 184 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 OR8G1Q15617 311 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 CST6Q15828 149 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 C12orf74Q32Q52 190 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 LINC00483Q53H64 154 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 LDLRAD2Q5SZI1 272 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 C10orf91Q5T1B1 145 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 FKBP1CQ5VVH2 108 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 Q6ZS49 121 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 GPHB5Q86YW7 130 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF695Q8IW36 515 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 FAM24BQ8N5W8 94 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 C12orf29Q8N999 325 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 SLC25A40Q8TBP6 338 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 RPS4Y2Q8TD47 263 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 GPR119Q8TDV5 335 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 OR5P3Q8WZ94 311 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 ERMAPQ96PL5 475 aaPredicted RBP2.65□□□□□ -1.99
VPS13D-207ENST00000476169 AIF1LQ9BQI0 150 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 SEC22CQ9BRL7 303 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 MIXL1Q9H2W2 232 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 C11orf68Q9H3H3 251 aaKnown RBP2.65□□□□□ -1.99
VPS13D-207ENST00000476169 FBXL12Q9NXK8 326 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 OR5V1Q9UGF6 321 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 PRNDQ9UKY0 176 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 YLPM1P49750 1951 aaKnown RBP2.65□□□□□ -1.99
VPS13D-207ENST00000476169 LRRC37AA6NMS7 1700 aa2.65□□□□□ -1.99
VPS13D-207ENST00000476169 PLXNB3Q9ULL4 1909 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 IGLV3-16A0A075B6K0 115 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 TRAV9-1A0A075B6T8 112 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 TMEM150BA6NC51 233 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 CYSRT1A8MQ03 144 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms