RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TRGC1P0CF51 173 aa1□□□□□ -2.25
SMC4-205ENST00000465563 HIST1H1TP22492 207 aaPredicted RBP1□□□□□ -2.25
SMC4-205ENST00000465563 FXYD2P54710 66 aa1□□□□□ -2.25
SMC4-205ENST00000465563 SUPT4H1P63272 117 aaKnown RBP1□□□□□ -2.25
SMC4-205ENST00000465563 Q6ZS49 121 aa1□□□□□ -2.25
SMC4-205ENST00000465563 TMEM86AQ8N2M4 240 aa1□□□□□ -2.25
SMC4-205ENST00000465563 OR8J2Q8NGG1 315 aa1□□□□□ -2.25
SMC4-205ENST00000465563 IMP4Q96G21 291 aaKnown RBP1□□□□□ -2.25
SMC4-205ENST00000465563 DERL1Q9BUN8 251 aa1□□□□□ -2.25
SMC4-205ENST00000465563 MRPS26Q9BYN8 205 aaKnown RBP1□□□□□ -2.25
SMC4-205ENST00000465563 WDR61Q9GZS3 305 aaKnown RBP1□□□□□ -2.25
SMC4-205ENST00000465563 TP73-AS1Q9UF72 201 aa1□□□□□ -2.25
SMC4-205ENST00000465563 ROS1P08922 2347 aa1□□□□□ -2.25
SMC4-205ENST00000465563 HECW2Q9P2P5 1572 aa1□□□□□ -2.25
SMC4-205ENST00000465563 TNRC6AQ8NDV7 1962 aaKnown RBP0.99□□□□□ -2.25
SMC4-205ENST00000465563 PLB1Q6P1J6 1458 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 WRNQ14191 1432 aaPredicted RBP eCLIP0.99□□□□□ -2.25
SMC4-205ENST00000465563 MTUS2Q5JR59 1369 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 GGT3PA6NGU5 568 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 FABP5P3A8MUU1 101 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 MRPS14O60783 128 aaKnown RBP0.99□□□□□ -2.25
SMC4-205ENST00000465563 IFNA16P05015 189 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 LYNX1P0DP58 116 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 GRK1Q15835 563 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 C8orf74Q6P047 294 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 Q8N2B8 174 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 OR8B3Q8NGG8 313 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 MRPL30Q8TCC3 161 aaKnown RBP0.99□□□□□ -2.25
SMC4-205ENST00000465563 BAIAP2Q9UQB8 552 aa0.99□□□□□ -2.25
SMC4-205ENST00000465563 CACNA1BQ00975 2339 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 HECW1Q76N89 1606 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 IRGMA1A4Y4 181 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 M0R036 132 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 SLC22A1O15245 554 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 CHP2O43745 196 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 ORC5O43913 435 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 CRPP02741 224 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 ANGP03950 147 aaKnown RBP0.98□□□□□ -2.25
SMC4-205ENST00000465563 NFYAP23511 347 aaPredicted RBP0.98□□□□□ -2.25
SMC4-205ENST00000465563 SPCS3P61009 180 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 ACOT6Q3I5F7 207 aaPredicted RBP0.98□□□□□ -2.25
SMC4-205ENST00000465563 AADACL3Q5VUY0 350 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 LRRC25Q8N386 305 aaPredicted RBP0.98□□□□□ -2.25
SMC4-205ENST00000465563 OR5B17Q8NGF7 314 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 PPP1R2P1Q96PQ5 205 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 OR52E6Q96RD3 313 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 CST9LQ9H4G1 147 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 FAM96AQ9H5X1 160 aa0.98□□□□□ -2.25
SMC4-205ENST00000465563 MRPL27Q9P0M9 148 aaKnown RBP0.98□□□□□ -2.25
SMC4-205ENST00000465563 MYH7BA7E2Y1 1941 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 TNRC6BQ9UPQ9 1833 aaKnown RBP0.97□□□□□ -2.25
SMC4-205ENST00000465563 SERPINA6P08185 405 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 RPSAP08865 295 aaKnown RBP0.97□□□□□ -2.25
SMC4-205ENST00000465563 G6PCP35575 357 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 SULT1A1P50225 295 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 SNRPD2P62316 118 aaKnown RBP0.97□□□□□ -2.25
SMC4-205ENST00000465563 ZNF345Q14585 488 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 ELOBQ15370 118 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 CCDC122Q5T0U0 273 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 HIST2H3PS2Q5TEC6 136 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 DCXRQ7Z4W1 244 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 C15orf53Q8NAA6 179 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 PFN4Q8NHR9 129 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 RASSF5Q8WWW0 418 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 C11orf40Q8WZ69 217 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 NIPSNAP1Q9BPW8 284 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 FBXL12Q9NXK8 326 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 SCN10AQ9Y5Y9 1956 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 SETD5Q9C0A6 1442 aa0.97□□□□□ -2.25
SMC4-205ENST00000465563 NUP155O75694 1391 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 SCN3AQ9NY46 2000 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 DENND4CQ5VZ89 1909 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 CEP192Q8TEP8 1941 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 KPNA3O00505 521 aaPredicted RBP0.96□□□□□ -2.26
SMC4-205ENST00000465563 FAAHO00519 579 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 HLA-DRB1P01911 266 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 RPS4Y1P22090 263 aaKnown RBP0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST1H2BOP23527 126 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST1H2BBP33778 126 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 RPL5P46777 297 aaKnown RBP0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST1H2BDP58876 126 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST1H2BCP62807 126 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST2H2BEQ16778 126 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.96□□□□□ -2.26
SMC4-205ENST00000465563 C20orf196Q8IYI0 205 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 OR13C4Q8NGS5 318 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST1H2BHQ93079 126 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 TSPAN32Q96QS1 320 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST1H2BNQ99877 126 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 HIST1H2BMQ99879 126 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 ADAT1Q9BUB4 502 aaKnown RBP0.96□□□□□ -2.26
SMC4-205ENST00000465563 VPS29Q9UBQ0 182 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 PKIGQ9Y2B9 76 aa0.96□□□□□ -2.26
SMC4-205ENST00000465563 TOPBP1Q92547 1522 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 ECM29Q5VYK3 1845 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 CLDN24A6NM45 220 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 SHBGP04278 402 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 METTL15P1P0C7V9 234 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 CD79AP11912 226 aa0.95□□□□□ -2.26
SMC4-205ENST00000465563 RNASE3P12724 160 aaKnown RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms