RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 ARAP3Q8WWN8 1544 aa2.3□□□□□ -2.04
VPS8-215ENST00000460158 CEP170Q5SW79 1584 aa2.3□□□□□ -2.04
VPS8-215ENST00000460158 ANKRD26Q9UPS8 1709 aa2.3□□□□□ -2.04
VPS8-215ENST00000460158 DSCAML1Q8TD84 2053 aa2.3□□□□□ -2.04
VPS8-215ENST00000460158 DISP2A7MBM2 1401 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 IGHV1-45A0A0A0MS14 117 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 IGKV6D-21A0A0A0MT36 114 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 LINC00862A6NCI5 91 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 A8MUN3 132 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 GABARAPH6UMI1 98 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 LYZL6O75951 148 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 SNAPC5O75971 98 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 SLC25A14O95258 325 aaPredicted RBP2.29□□□□□ -2.04
VPS8-215ENST00000460158 IGLV3-27P01718 113 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 HLA-DQB1P01920 261 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 GPX1P07203 203 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 SEC11BP0C7V7 166 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 MUC1P15941 1255 aaPredicted RBP2.29□□□□□ -2.04
VPS8-215ENST00000460158 ELK1P19419 428 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 CASP1P29466 404 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 NUDT2P50583 147 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 NDUFA6P56556 154 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 LINC00313P59037 77 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 PSG7Q13046 419 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 ENDOGQ14249 297 aaKnown RBP2.29□□□□□ -2.04
VPS8-215ENST00000460158 MPV17L2Q567V2 206 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 GLYATL3Q5SZD4 288 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 WDR86Q86TI4 376 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 LINC01551Q86U37 167 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 ZNF429Q86V71 674 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 MMGT1Q8N4V1 131 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 ZDHHC22Q8N966 263 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 LINC01555Q8NAE3 123 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 ZNF555Q8NEP9 628 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 OR10D4PQ8NGN7 298 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 FAM57AQ8TBR7 257 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 C2orf15Q8WU43 125 aaKnown RBP2.29□□□□□ -2.04
VPS8-215ENST00000460158 MAGOHBQ96A72 148 aaKnown RBP2.29□□□□□ -2.04
VPS8-215ENST00000460158 C18orf15Q96N68 181 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 ANAPC11Q9NYG5 84 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 SOX21Q9Y651 276 aaPredicted RBP2.29□□□□□ -2.04
VPS8-215ENST00000460158 ATRXP46100 2492 aa2.29□□□□□ -2.04
VPS8-215ENST00000460158 ZFC3H1O60293 1989 aaKnown RBP2.29□□□□□ -2.04
VPS8-215ENST00000460158 KIF20BQ96Q89 1820 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 KIF13AQ9H1H9 1805 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 ARHGEF11O15085 1522 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 TMEM218A2RU14 115 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 TLCD2A6NGC4 264 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 IGLL5B9A064 214 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 H7BYZ3 331 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 J3QQQ9 107 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 FSTL3O95633 263 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 LTAP01374 205 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 IGLV2-8P01709 118 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 TRGC2P03986 189 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 MAS1P04201 325 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 NFYBP25208 207 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 OPRM1P35372 400 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 CXCL12P48061 93 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 GNG4P50150 75 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 RAB5CP51148 216 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 RBM11P57052 281 aaKnown RBP2.28□□□□□ -2.04
VPS8-215ENST00000460158 RPS11P62280 158 aaKnown RBP eCLIP2.28□□□□□ -2.04
VPS8-215ENST00000460158 GNB2P62879 340 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 ATP5G2Q06055 141 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 TMEM183BQ1AE95 376 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 LDLRAD2Q5SZI1 272 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 CEMP1Q6PRD7 247 aaPredicted RBP2.28□□□□□ -2.04
VPS8-215ENST00000460158 UNQ9165/PRO28630Q6UXU0 137 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 CAMK2N1Q7Z7J9 78 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 PRR15Q8IV56 129 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 TMEM183AQ8IXX5 376 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 ZNF664Q8N3J9 261 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 OR5A2Q8NGI9 324 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 PPTC7Q8NI37 304 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 LMX1AQ8TE12 382 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 ZNF721Q8TF20 911 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 C7orf33Q8WU49 177 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 SFT2D1Q8WV19 159 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 HIST1H2BAQ96A08 127 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 DERL3Q96Q80 235 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 CAMK2N2Q96S95 79 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 GPX7Q96SL4 187 aaPredicted RBP2.28□□□□□ -2.04
VPS8-215ENST00000460158 GGTLC1Q9BX51 225 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 AICDAQ9GZX7 198 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 TCEAL2Q9H3H9 227 aaPredicted RBP2.28□□□□□ -2.04
VPS8-215ENST00000460158 PLXNB3Q9ULL4 1909 aa2.28□□□□□ -2.04
VPS8-215ENST00000460158 PIK3C2AO00443 1686 aa2.28□□□□□ -2.05
VPS8-215ENST00000460158 GRIN2AQ12879 1464 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 NEO1Q92859 1461 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 SIPA1L1O43166 1804 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 TRAV30A0A087WSZ9 112 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 TRAV41A0A0B4J266 112 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 A0A1W2PNU3 283 aaPredicted RBP2.27□□□□□ -2.05
VPS8-215ENST00000460158 IRGMA1A4Y4 181 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 TMEM212A6NML5 194 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 BBIP1A8MTZ0 92 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 INS-IGF2F8WCM5 200 aa2.27□□□□□ -2.05
VPS8-215ENST00000460158 RBFOX2O43251 390 aaKnown RBP eCLIP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms