RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 OR10W1Q8NGF6 305 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 OR1P1Q8NH06 330 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 KLK15Q9H2R5 256 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 THYN1Q9P016 225 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 ADAP1O75689 374 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 RPLP1P05386 114 aaKnown RBP11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 APELAP0DMC3 54 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 SUB1P53999 127 aaKnown RBP eCLIP11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 TPPP2P59282 170 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 RUNX1Q01196 453 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 SRSF4Q08170 494 aaKnown RBP11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 KIAA0141Q14154 515 aaPredicted RBP11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 TATDN3Q17R31 274 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 C2orf68Q2NKX9 166 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 ZNF491Q8N8L2 437 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 C11orf44Q8N8P7 122 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 F11RQ9Y624 299 aaKnown RBP11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 ANK2Q01484 3957 aa11.14□□□□□ -0.63
HMGXB4-204ENST00000455359 M0QZ24 198 aa11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 SNCAP37840 140 aa11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 HOXA1P49639 335 aaPredicted RBP11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 ID3Q02535 119 aa11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 IAH1Q2TAA2 248 aaPredicted RBP11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 NOXA1Q86UR1 476 aa11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 UXS1Q8NBZ7 420 aa11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 C4orf3Q8WVX3 66 aa11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 CIB3Q96Q77 187 aaPredicted RBP11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 HIPK2Q9H2X6 1198 aa11.13□□□□□ -0.63
HMGXB4-204ENST00000455359 IGLV11-55A0A075B6I3 123 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 C13orf42A0A1B0GVH6 325 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 CEBPZOSA8MTT3 80 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 ADARB2-AS1A8MUL3 147 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 HTR2BP41595 481 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 RHOGP84095 191 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 KHDC1LQ5JSQ8 128 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 OR4F17Q8NGA8 305 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 C2orf50Q96LR7 162 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 OR4F4Q96R69 305 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 HEYLQ9NQ87 328 aaPredicted RBP11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 U3KQ87 197 aa11.12□□□□□ -0.63
HMGXB4-204ENST00000455359 CORTO00230 105 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 SSNA1O43805 119 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 REG1AP05451 166 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 NKX2-1P43699 371 aaPredicted RBP11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 ATP5G2Q06055 141 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 BSXQ3C1V8 233 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 GSG1LQ6UXU4 331 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 ZBTB8BQ8NAP8 495 aaPredicted RBP11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 DTD1Q8TEA8 209 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 CXorf58Q96LI9 332 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 P2RX4Q99571 388 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 FBXL7Q9UJT9 491 aa11.11□□□□□ -0.63
HMGXB4-204ENST00000455359 C5orf51A6NDU8 294 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 MPTX1A8MV57 137 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 NUDT19A8MXV4 375 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 SYNGR2O43760 224 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 LGALS1P09382 135 aaKnown RBP11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 RPP30P78346 268 aaKnown RBP11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 CYCSP99999 105 aaKnown RBP11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 SPINK9Q5DT21 86 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 SLC25A24Q6NUK1 477 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 LCNL1Q6ZST4 164 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 VN1R17PQ8TDU5 208 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 OR10C1Q96KK4 312 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 RBKSQ9H477 322 aa11.1□□□□□ -0.63
HMGXB4-204ENST00000455359 FAM25EA8MYX2 175 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 WRBO00258 174 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 OR2J3O76001 311 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 PRH1P02810 166 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 C15orf32Q32M92 178 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 NSUN5P1Q3KNT7 163 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 ZNF343Q6P1L6 599 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 KLHL30-AS1Q8NEE0 82 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 SLC24A4Q8NFF2 622 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 GSKIPQ9P0R6 139 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 DMRT1Q9Y5R6 373 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 ALG5Q9Y673 324 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 DNHD1Q96M86 4753 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 TRBV7-1A0A0A6YYK4 115 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 I3L521 148 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 NDUFB8O95169 186 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 MYCNOSP40205 109 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 TAS2R30P59541 319 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 IL15RAQ13261 267 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 EXOSC2Q13868 293 aaKnown RBP11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 RAB40CQ96S21 281 aa11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 GAR1Q9NY12 217 aaKnown RBP11.09□□□□□ -0.63
HMGXB4-204ENST00000455359 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
HMGXB4-204ENST00000455359 A0A1W2PRX2 142 aa11.08□□□□□ -0.64
HMGXB4-204ENST00000455359 CCSO14618 274 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms