RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GCSAMLQ5JQS6 135 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 SSC4DQ8WTU2 575 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 ELOVL5Q9NYP7 299 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 TMEM50AO95807 157 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 IGHV1-18A0A0C4DH31 117 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 CD59P13987 128 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 FAM27E3Q08E93 113 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 EFNB3Q15768 340 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 RNASEH2CQ8TDP1 164 aaKnown RBP13.85□□□□□ -0.19
TCOF1-206ENST00000445265 MBNL3Q9NUK0 354 aaKnown RBP13.85□□□□□ -0.19
TCOF1-206ENST00000445265 ZNF585BQ52M93 769 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 PYY3Q5JQD4 70 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 LINC00305Q7Z4B0 112 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 GGTLC1Q9BX51 225 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 ROS1P08922 2347 aa13.85□□□□□ -0.19
TCOF1-206ENST00000445265 CDX4O14627 284 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-206ENST00000445265 LEPROTL1O95214 131 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 REG1AP05451 166 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 TEX38Q6PEX7 206 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 OCC1Q8TAD7 63 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 GRAMD2BQ96HH9 432 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 IGHV3-48P01763 117 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 EAF1Q96JC9 268 aaPredicted RBP13.84□□□□□ -0.19
TCOF1-206ENST00000445265 RNF115Q9Y4L5 304 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 MBNL2Q5VZF2 373 aaKnown RBP13.84□□□□□ -0.19
TCOF1-206ENST00000445265 TMUB1Q9BVT8 246 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 AMBPP02760 352 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 ORM1P02763 201 aa13.84□□□□□ -0.19
TCOF1-206ENST00000445265 LINC01551Q86U37 167 aa13.83□□□□□ -0.19
TCOF1-206ENST00000445265 PEX7O00628 323 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 GOSR1O95249 250 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 PAX9P55771 341 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 FOXL1Q12952 345 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 LYPD6BQ8NI32 183 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 PGLYRP4Q96LB8 373 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 MRPL20Q9BYC9 149 aaKnown RBP13.83□□□□□ -0.2
TCOF1-206ENST00000445265 NBEAP1P0C6P0 100 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 SAA1P0DJI8 122 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-206ENST00000445265 PRCDQ00LT1 54 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 OR4A5Q8NH83 315 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 CLEC7AQ9BXN2 247 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 TMEM106BQ9NUM4 274 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 A0A1W2PRE2 83 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 PGPEP1LA6NFU8 196 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 J3QR89 54 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 OSTCQ9NRP0 149 aa13.83□□□□□ -0.2
TCOF1-206ENST00000445265 GATA2P23769 480 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-206ENST00000445265 TBR1Q16650 682 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 COQ2Q96H96 371 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 TBL2Q9Y4P3 447 aaKnown RBP13.82□□□□□ -0.2
TCOF1-206ENST00000445265 DPRXA6NFQ7 191 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 IFITM10A6NMD0 228 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 NTF4P34130 210 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 HBBP68871 147 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 ZNF738Q8NE65 137 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 PLSCR4Q9NRQ2 329 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 HEATR1Q9H583 2144 aaKnown RBP13.82□□□□□ -0.2
TCOF1-206ENST00000445265 TMSB15BA0A087X1C1 80 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 SERF1AO75920 110 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 MOSP00540 346 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 PRSS1P07477 247 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 KIR2DL2P43627 348 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-206ENST00000445265 PET117Q6UWS5 81 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 TCF23Q7RTU1 214 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 C11orf42Q8N5U0 333 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 C2orf16Q68DN1 1984 aa13.82□□□□□ -0.2
TCOF1-206ENST00000445265 IGHV1-69-2A0A0G2JMI3 117 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 ADMP35318 185 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 RALYQ9UKM9 306 aaKnown RBP13.81□□□□□ -0.2
TCOF1-206ENST00000445265 SPTBN2O15020 2390 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 PPIAL4CA0A0B4J2A2 164 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 BMPR1BO00238 502 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 PPIAL4GP0DN37 164 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 Q6ZSR3 168 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 SGK494Q96LW2 274 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 FER1L5A0AVI2 2057 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 SMIM17P0DL12 118 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 MYO7BQ6PIF6 2116 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 ZNF600Q6ZNG1 722 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 TRAV30A0A087WSZ9 112 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 TMEM189A5PLL7 270 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 TIMP3P35625 211 aa13.81□□□□□ -0.2
TCOF1-206ENST00000445265 HOXA4Q00056 320 aaPredicted RBP13.81□□□□□ -0.2
TCOF1-206ENST00000445265 CD69Q07108 199 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 TMEM97Q5BJF2 176 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 OR8A1Q8NGG7 326 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 ZNF257Q9Y2Q1 563 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 HILPDAQ9Y5L2 63 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 OR2T8A6NH00 312 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 LINC00473A8K010 186 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 C17orf100A8MU93 164 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 Q8NFD4 153 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 FOXA2Q9Y261 457 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-206ENST00000445265 IZUMO1RA6ND01 250 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 CBY3A6NI87 242 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 CD177Q8N6Q3 437 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 DKK1O94907 266 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 DNLZQ5SXM8 178 aa13.8□□□□□ -0.2
TCOF1-206ENST00000445265 PEAR1Q5VY43 1037 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-206ENST00000445265 FAM57AQ8TBR7 257 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms