RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 NDUFS7O75251 213 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 YIF1AO95070 293 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 MT-CO2P00403 227 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 PAX6P26367 422 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 COMPP49747 757 aaPredicted RBP12.61□□□□□ -0.39
SNX13-204ENST00000444712 PDLIM4P50479 330 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 CEBPGP53567 150 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 RHOBP62745 196 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 MINOS1Q5TGZ0 78 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 ETFRF1Q6IPR1 90 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 SLC16A13Q7RTY0 426 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 PPP1R27Q86WC6 154 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 CBLN2Q8IUK8 224 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 STPG3Q8N7X2 389 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 ZNF114Q8NC26 417 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 NANPQ8TBE9 248 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 METTL1Q9UBP6 276 aaKnown RBP12.61□□□□□ -0.39
SNX13-204ENST00000444712 PUS1Q9Y606 427 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNX13-204ENST00000444712 MINOS1-NBL1R4GNA1 71 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 CGB1A6NKQ9 187 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 SNRNP70P08621 437 aaKnown RBP12.61□□□□□ -0.39
SNX13-204ENST00000444712 WT1-ASQ06250 92 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 PNRC1Q12796 327 aaPredicted RBP12.61□□□□□ -0.39
SNX13-204ENST00000444712 HABP2Q14520 560 aaPredicted RBP12.61□□□□□ -0.39
SNX13-204ENST00000444712 TNXAQ16473 311 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 TVP23CQ96ET8 276 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 C1orf159Q96HA4 380 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 TXNDC17Q9BRA2 123 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 SRSF8Q9BRL6 282 aaKnown RBP12.61□□□□□ -0.39
SNX13-204ENST00000444712 C19orf24Q9BVV8 132 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
SNX13-204ENST00000444712 TMEM250H0YL14 139 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 H3BQ15 152 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 CORTO00230 105 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 CXorf1O96002 111 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 PRR20EP86478 221 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 PRR20CP86479 221 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 PRR20DP86480 221 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 PRR20BP86481 221 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 PRR20AP86496 221 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 GAMTQ14353 236 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 MRGPRG-AS1Q2M3A8 158 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 VMO1Q7Z5L0 202 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 RITA1Q96K30 269 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 SPOCK3Q9BQ16 436 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 TPSG1Q9NRR2 321 aa12.6□□□□□ -0.39
SNX13-204ENST00000444712 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 E7EUB6 86 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 TIMM23O14925 209 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 FOXH1O75593 365 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 VENTXO95231 258 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 AKIRIN2Q53H80 203 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 HCP5Q6MZN7 132 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 IQCF2Q8IXL9 164 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 C15orf54Q8N8G6 183 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 SSMEM1Q8WWF3 244 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 SLC45A2Q9UMX9 530 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 NBEAQ8NFP9 2946 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 B4DEV8 164 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 HMGB3O15347 200 aaKnown RBP12.59□□□□□ -0.39
SNX13-204ENST00000444712 STAG3L2P0CL84 134 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 STAG3L3P0CL85 134 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 ATF4P18848 351 aaPredicted RBP12.59□□□□□ -0.39
SNX13-204ENST00000444712 LGALS4P56470 323 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 PRB3Q04118 309 aaPredicted RBP12.59□□□□□ -0.39
SNX13-204ENST00000444712 C10orf55Q5SWW7 151 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 CCL19Q99731 98 aa12.59□□□□□ -0.39
SNX13-204ENST00000444712 IGLC7A0M8Q6 106 aa12.58□□□□□ -0.4
SNX13-204ENST00000444712 MOSP00540 346 aa12.58□□□□□ -0.4
SNX13-204ENST00000444712 FBP1P09467 338 aa12.58□□□□□ -0.4
SNX13-204ENST00000444712 PLGLAQ15195 96 aa12.58□□□□□ -0.4
SNX13-204ENST00000444712 FAM90A2PQ658T7 463 aa12.58□□□□□ -0.4
SNX13-204ENST00000444712 IGFBPL1Q8WX77 278 aa12.58□□□□□ -0.4
SNX13-204ENST00000444712 BPESC1Q9GZL8 116 aa12.58□□□□□ -0.4
SNX13-204ENST00000444712 SIRPDQ9H106 197 aa12.58□□□□□ -0.4
SNX13-204ENST00000444712 TBL2Q9Y4P3 447 aaKnown RBP12.58□□□□□ -0.4
SNX13-204ENST00000444712 A0A087WWC5 75 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 ZFP36P26651 326 aaKnown RBP12.57□□□□□ -0.4
SNX13-204ENST00000444712 CNTFRP26992 372 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 PAX2Q02962 417 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 KLRD1Q13241 179 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 GCSAMLQ5JQS6 135 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 PVRIGQ6DKI7 326 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 C22orf15Q8WYQ4 148 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 CFHR4Q92496 578 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 RNF2Q99496 336 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 C20orf24Q9BUV8 137 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 TMPRSS5Q9H3S3 457 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 NDUFS8O00217 210 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 NBR2O15453 112 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 HOXB4P17483 251 aaPredicted RBP12.57□□□□□ -0.4
SNX13-204ENST00000444712 OR10J1P30954 320 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 CD81P60033 236 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 NPBQ8NG41 125 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 C17orf50Q8WW18 174 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 PIMREGQ9BSJ6 248 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 HILPDAQ9Y5L2 63 aa12.57□□□□□ -0.4
SNX13-204ENST00000444712 PDE6DO43924 150 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 IGHV4-39P01824 125 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 LINC00869P0C866 280 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms