RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 ZNF146Q15072 292 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 CLDND2Q8NHS1 167 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 TET1Q8NFU7 2136 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 MIR17HGQ75NE6 70 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 C3orf56Q8N813 242 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 PEMTQ9UBM1 199 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
SPG11-202ENST00000427534 GREB1LQ9C091 1923 aaPredicted RBP11.04□□□□□ -0.64
SPG11-202ENST00000427534 MRAPQ8TCY5 172 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 RBBP6Q7Z6E9 1792 aaKnown RBP11.04□□□□□ -0.64
SPG11-202ENST00000427534 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 RAMP3O60896 148 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 PLPPR1Q8TBJ4 325 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 TMEM14DPA8MWL7 114 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 IFNL4K9M1U5 179 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 MLNRO43193 412 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 LEPROTL1O95214 131 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 Q0VFX4 171 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 ZNF660Q6AZW8 331 aaPredicted RBP11.04□□□□□ -0.64
SPG11-202ENST00000427534 C5orf24Q7Z6I8 188 aa11.04□□□□□ -0.64
SPG11-202ENST00000427534 PSMG4Q5JS54 123 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 IGFL4Q6B9Z1 124 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 ZIC4Q8N9L1 334 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 PRSS22Q9GZN4 317 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 NPFFR1Q9GZQ6 430 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 NMBP08949 121 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
SPG11-202ENST00000427534 COL5A1-AS1Q5SY13 56 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 NRIP2Q9BQI9 281 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 TMEM70Q9BUB7 260 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 M0R143 59 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 IGLV3-19P01714 112 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 Q5BKY6 102 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 CFAP161Q6P656 301 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 TXNDC17Q9BRA2 123 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 NPIPB9F8W1W9 429 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 PSCAO43653 123 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 CBLN1P23435 193 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 OR9G4Q8NGQ1 327 aa11.03□□□□□ -0.64
SPG11-202ENST00000427534 FAM74A7A6NL05 159 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 PEX7O00628 323 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 TIMM23O14925 209 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 CD55P08174 381 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 RHOGP84095 191 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 TMEM187Q14656 261 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 OR10W1Q8NGF6 305 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 C1QTNF9BB2RNN3 333 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 C1QTNF9P0C862 333 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 KCNS1Q96KK3 526 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 COL4A6Q14031 1691 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 HEATR5BQ9P2D3 2071 aa11.02□□□□□ -0.64
SPG11-202ENST00000427534 A0A0G2JK05 382 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 GCHFRP30047 84 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 FAM110DQ8TAY7 271 aaPredicted RBP11.02□□□□□ -0.65
SPG11-202ENST00000427534 CFHR3Q02985 330 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 RUSC1-AS1Q66K80 236 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 OR1P1Q8NH06 330 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 TMEM167AQ8TBQ9 72 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 KBTBD11-OT1A0A1B0GTJ5 212 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 RPL15P61313 204 aaKnown RBP11.02□□□□□ -0.65
SPG11-202ENST00000427534 SELENOTP62341 195 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 ZNF324BQ6AW86 544 aaPredicted RBP11.02□□□□□ -0.65
SPG11-202ENST00000427534 LOC390937A0A1W2PQ73 354 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 FAM209BQ5JX69 171 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 TMEM42Q69YG0 159 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 ZNF525Q8N782 197 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 PMCHL2Q9BQD1 86 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 CRIM1Q9NZV1 1036 aa11.02□□□□□ -0.65
SPG11-202ENST00000427534 FOXD3Q9UJU5 478 aaPredicted RBP11.02□□□□□ -0.65
SPG11-202ENST00000427534 SHISA3A0PJX4 238 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 CRPP02741 224 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 H2BFSP57053 126 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 SMDT1Q9H4I9 107 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 FER1L5A0AVI2 2057 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 SCN10AQ9Y5Y9 1956 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 A0A0G2JLM5 398 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 ATP5G3P48201 142 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 MEF2BQ02080 365 aaPredicted RBP11.01□□□□□ -0.65
SPG11-202ENST00000427534 REC114Q7Z4M0 266 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 TMEM45BQ96B21 275 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 ANKRD36A6QL64 1941 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 SIPA1L1O43166 1804 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 CRIPAKQ8N1N5 446 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 SLC25A28Q96A46 364 aa11.01□□□□□ -0.65
SPG11-202ENST00000427534 TBX6O95947 436 aaPredicted RBP11□□□□□ -0.65
SPG11-202ENST00000427534 PMCHL1Q16048 86 aa11□□□□□ -0.65
SPG11-202ENST00000427534 FAM89BQ8N5H3 189 aa11□□□□□ -0.65
SPG11-202ENST00000427534 TRGC1P0CF51 173 aa11□□□□□ -0.65
SPG11-202ENST00000427534 LCNL1Q6ZST4 164 aa11□□□□□ -0.65
SPG11-202ENST00000427534 COX6CP09669 75 aa11□□□□□ -0.65
SPG11-202ENST00000427534 NBEAP1P0C6P0 100 aa11□□□□□ -0.65
SPG11-202ENST00000427534 RND3P61587 244 aa11□□□□□ -0.65
SPG11-202ENST00000427534 SFRP2Q96HF1 295 aa11□□□□□ -0.65
SPG11-202ENST00000427534 SDF2L1Q9HCN8 221 aa11□□□□□ -0.65
SPG11-202ENST00000427534 SP5Q6BEB4 398 aaPredicted RBP11□□□□□ -0.65
SPG11-202ENST00000427534 FAM131CQ96AQ9 280 aa11□□□□□ -0.65
SPG11-202ENST00000427534 SSBP4Q9BWG4 385 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms