RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-206	ENST00000423161	FKBP11	Q9NYL4	201 aa		13.75	□□□□□ -0.21
SREBF1-206	ENST00000423161	EPPK1	P58107	5090 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-206	ENST00000423161	HYDIN	Q4G0P3	5121 aa		13.75	□□□□□ -0.21
SREBF1-206	ENST00000423161	C15orf61	A6NNL5	157 aa		13.74	□□□□□ -0.21
SREBF1-206	ENST00000423161	ZNF207	O43670	478 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-206	ENST00000423161	EIF4E	P06730	217 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-206	ENST00000423161	ADM	P35318	185 aa		13.74	□□□□□ -0.21
SREBF1-206	ENST00000423161	APOC4	P55056	127 aa		13.74	□□□□□ -0.21
SREBF1-206	ENST00000423161	TSPAN5	P62079	268 aa		13.74	□□□□□ -0.21
SREBF1-206	ENST00000423161	TMEM14B	Q9NUH8	114 aa		13.74	□□□□□ -0.21
SREBF1-206	ENST00000423161	DBX1	A6NMT0	343 aa		13.73	□□□□□ -0.21
SREBF1-206	ENST00000423161	S100G	P29377	79 aa		13.73	□□□□□ -0.21
SREBF1-206	ENST00000423161	ODF3L2	Q3SX64	289 aa		13.73	□□□□□ -0.21
SREBF1-206	ENST00000423161	LPCAT3	Q6P1A2	487 aa		13.73	□□□□□ -0.21
SREBF1-206	ENST00000423161	GPX8	Q8TED1	209 aa		13.73	□□□□□ -0.21
SREBF1-206	ENST00000423161	SLC25A46	Q96AG3	418 aa		13.73	□□□□□ -0.21
SREBF1-206	ENST00000423161	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-206	ENST00000423161		A0A087WXM4	84 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161		A0A0J9YWU9	116 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161	OR4C46	A6NHA9	309 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161		K7EMT4	169 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161	DEFB135	Q30KP9	77 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161		Q6ZWC4	215 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161	TBC1D26	Q86UD7	250 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161	WFDC3	Q8IUB2	231 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161	OR1P1	Q8NH06	330 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161	COMMD3	Q9UBI1	195 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161	TP53TG1	Q9Y2A0	90 aa		13.72	□□□□□ -0.21
SREBF1-206	ENST00000423161	SMIM31	A0A1B0GVY4	71 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	C15orf62	A8K5M9	175 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	SPRY2	O43597	315 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	CTSD	P07339	412 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	CTSG	P08311	255 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	PMS2P11	Q13670	270 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	SNX29P2	Q8IUI4	249 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	MISP3	Q96FF7	219 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	SEC22A	Q96IW7	307 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	SCPEP1	Q9HB40	452 aa		13.71	□□□□□ -0.21
SREBF1-206	ENST00000423161	CXorf65	A6NEN9	183 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	UBE2C	O00762	179 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	NUPL2	O15504	423 aa	Known RBP	13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	APOA1	P02647	267 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	BMI1	P35226	326 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	RCVRN	P35243	200 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	REL	Q04864	619 aa	Predicted RBP	13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	H2BFWT	Q7Z2G1	175 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	LYG2	Q86SG7	212 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	STPG3	Q8N7X2	389 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	OR4A16	Q8NH70	328 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	SMPX	Q9UHP9	88 aa		13.7	□□□□□ -0.22
SREBF1-206	ENST00000423161	PLEC	Q15149	4684 aa	Known RBP	13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	BIRC6	Q9NR09	4857 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	KIR2DL5B	A0A0G2JN68	375 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	KIR2DL5B	A0A0G2JPC4	375 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	TNFAIP8	O95379	198 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	IGKV1-39	P01597	117 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	IGKV1D-39	P04432	117 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	RPL35A	P18077	110 aa	Known RBP	13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	MFAP4	P55083	255 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	NCS1	P62166	190 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	2e-7	■■■■□ 20.1
SREBF1-206	ENST00000423161	TNFRSF9	Q07011	255 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	KIR2DL5A	Q8N109	375 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	KIR2DL5B	Q8NHK3	375 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	MRGPRF	Q96AM1	343 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	ZNF414	Q96IQ9	312 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	CMTM3	Q96MX0	182 aa		13.69	□□□□□ -0.22
SREBF1-206	ENST00000423161	IGHV7-4-1	A0A0J9YVY3	117 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161		I3L2K1	104 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161	UCP3	P55916	312 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161	PRCD	Q00LT1	54 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161	ZNF114	Q8NC26	417 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161	LINC00476	Q8WZB0	136 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161	GALNT14	Q96FL9	552 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161	RNF2	Q99496	336 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161	RHPN1-AS1	Q9BWJ2	59 aa		13.68	□□□□□ -0.22
SREBF1-206	ENST00000423161	IGHV3-49	A0A0A0MS15	119 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	NUPR2	A6NF83	97 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	CHEK1	O14757	476 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	YIF1A	O95070	293 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	MT-CO2	P00403	227 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	IGHV3-48	P01763	117 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	ELK1	P19419	428 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	FCGR2B	P31994	310 aa	Predicted RBP	13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	VBP1	P61758	197 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	TMEM116	Q8NCL8	245 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	RNF183	Q96D59	192 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	OR10C1	Q96KK4	312 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	TXN2	Q99757	166 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161	FUNDC2	Q9BWH2	189 aa		13.67	□□□□□ -0.22
SREBF1-206	ENST00000423161		M0QYG6	137 aa		13.66	□□□□□ -0.22
SREBF1-206	ENST00000423161	HPGDS	O60760	199 aa		13.66	□□□□□ -0.22
SREBF1-206	ENST00000423161	HSPE1	P61604	102 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-206	ENST00000423161	APRG1	Q8IVJ8	170 aa		13.66	□□□□□ -0.22
SREBF1-206	ENST00000423161	PINX1	Q96BK5	328 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-206	ENST00000423161	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-206	ENST00000423161	NXF2	Q9GZY0	626 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-206	ENST00000423161	MAP6D1	Q9H9H5	199 aa		13.66	□□□□□ -0.22
SREBF1-206	ENST00000423161	IGKV3-7	A0A075B6H7	116 aa		13.65	□□□□□ -0.22
SREBF1-206	ENST00000423161	GNG7	O60262	68 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms