RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 PYDC2Q56P42 97 aa14.33□□□□□ -0.12
TRIM56-202ENST00000412507 ZNF502Q8TBZ5 544 aa14.33□□□□□ -0.12
TRIM56-202ENST00000412507 ZC4H2Q9NQZ6 224 aa14.33□□□□□ -0.12
TRIM56-202ENST00000412507 V9GYH0 126 aa14.33□□□□□ -0.12
TRIM56-202ENST00000412507 IGHV3-21A0A0B4J1V1 117 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 TEX13DA0A0J9YY54 714 aaPredicted RBP14.32□□□□□ -0.12
TRIM56-202ENST00000412507 ATG12O94817 140 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 CLEC3BP05452 202 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 OR5AC1P0C628 307 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 HSPE1P61604 102 aaKnown RBP14.32□□□□□ -0.12
TRIM56-202ENST00000412507 GPHB5Q86YW7 130 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 NAA60Q9H7X0 242 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 MCUBQ9NWR8 336 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 SLC2A8Q9NY64 477 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 SIGLEC8Q9NYZ4 499 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 SCP2D1Q9UJQ7 156 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 SMAD5-AS1Q9Y6J3 95 aa14.32□□□□□ -0.12
TRIM56-202ENST00000412507 EDN2P20800 178 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 GPR183P32249 361 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 PRCDQ00LT1 54 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 ZNF79Q15937 498 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 SPINK9Q5DT21 86 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 C11orf87Q6NUJ2 197 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 ADAMTSL5Q6ZMM2 481 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 LINC00299Q6ZSB3 139 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 CCDC190Q86UF4 302 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 Q8N402 240 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 VN1R17PQ8TDU5 208 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 TMEM222Q9H0R3 208 aa14.31□□□□□ -0.12
TRIM56-202ENST00000412507 A0A0B4J293 547 aa14.3□□□□□ -0.12
TRIM56-202ENST00000412507 LGALS9O00182 355 aa14.3□□□□□ -0.12
TRIM56-202ENST00000412507 B3GALNT1O75752 331 aa14.3□□□□□ -0.12
TRIM56-202ENST00000412507 OR2C3Q8N628 320 aa14.3□□□□□ -0.12
TRIM56-202ENST00000412507 RNASE11Q8TAA1 199 aaKnown RBP14.3□□□□□ -0.12
TRIM56-202ENST00000412507 LHFPL5Q8TAF8 219 aa14.3□□□□□ -0.12
TRIM56-202ENST00000412507 GLYATL2Q8WU03 294 aa14.3□□□□□ -0.12
TRIM56-202ENST00000412507 TRIM63Q969Q1 353 aa14.3□□□□□ -0.12
TRIM56-202ENST00000412507 RRNAD1Q96FB5 475 aaKnown RBP14.3□□□□□ -0.12
TRIM56-202ENST00000412507 A0A0G2JRQ6 117 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 IZUMO1RA6ND01 250 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 CRYM-AS1A6NIL9 109 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 C2orf70A6NJV1 201 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 CDS2O95674 445 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 KLF9Q13886 244 aaPredicted RBP14.29□□□□□ -0.12
TRIM56-202ENST00000412507 FAM106AQ4KMX7 169 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 TOMM5Q8N4H5 51 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 OR1L6Q8NGR2 347 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 OR1P1Q8NH06 330 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 SCARB1Q8WTV0 552 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 PLEKHA3Q9HB20 300 aa14.29□□□□□ -0.12
TRIM56-202ENST00000412507 IGHV3-35A0A0C4DH35 117 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 ZNF320A2RRD8 509 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 K7EIM0 57 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 ST8SIA3O43173 380 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 TGOLN2O43493 480 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 FOLR2P14207 255 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 DHODHQ02127 395 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 PLET1Q6UQ28 207 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 SELENOHQ8IZQ5 122 aaKnown RBP14.28□□□□□ -0.12
TRIM56-202ENST00000412507 TMEM230Q96A57 120 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 SCGB3A2Q96PL1 93 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 ASCL2Q99929 193 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 C21orf62Q9NYP8 219 aa14.28□□□□□ -0.12
TRIM56-202ENST00000412507 OR2T8A6NH00 312 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 IFNA17P01571 189 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 FAUP35544 74 aaKnown RBP14.27□□□□□ -0.13
TRIM56-202ENST00000412507 ERHP84090 104 aaKnown RBP14.27□□□□□ -0.13
TRIM56-202ENST00000412507 LCN12Q6JVE5 192 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 Q6ZRM9 215 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 SGPP2Q8IWX5 399 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 Q8N1Y9 231 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 SLC35G3Q8N808 338 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 ZNF114Q8NC26 417 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 DYNLRB2Q8TF09 96 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 CACNG8Q8WXS5 425 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 RBPMSQ93062 196 aaKnown RBP14.27□□□□□ -0.13
TRIM56-202ENST00000412507 MISP3Q96FF7 219 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 PDCD10Q9BUL8 212 aa14.27□□□□□ -0.13
TRIM56-202ENST00000412507 TMEM213A2RRL7 107 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 AKR1C4P17516 323 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 ETV6P41212 452 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 AP3S2P59780 193 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 DEFB114Q30KQ6 69 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 CD300EQ496F6 205 aaPredicted RBP14.26□□□□□ -0.13
TRIM56-202ENST00000412507 SPANXN2Q5MJ10 180 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 TMEM268Q5VZI3 342 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 UNQ9165/PRO28630Q6UXU0 137 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 UBAC2Q8NBM4 344 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 OR2K2Q8NGT1 345 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 PRR13Q9NZ81 148 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 SELENOKQ9Y6D0 94 aa14.26□□□□□ -0.13
TRIM56-202ENST00000412507 A8MWP6 167 aa14.25□□□□□ -0.13
TRIM56-202ENST00000412507 F8W735 103 aaPredicted RBP14.25□□□□□ -0.13
TRIM56-202ENST00000412507 CBLN1P23435 193 aa14.25□□□□□ -0.13
TRIM56-202ENST00000412507 TMEM187Q14656 261 aa14.25□□□□□ -0.13
TRIM56-202ENST00000412507 TM4SF20Q53R12 229 aa14.25□□□□□ -0.13
TRIM56-202ENST00000412507 Q56UQ5 140 aa14.25□□□□□ -0.13
TRIM56-202ENST00000412507 FAM219AQ8IW50 185 aa14.25□□□□□ -0.13
TRIM56-202ENST00000412507 BSCL2Q96G97 398 aaPredicted RBP14.25□□□□□ -0.13
TRIM56-202ENST00000412507 CHRDL1Q9BU40 450 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms