RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PHLDA2Q53GA4 152 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 LINC00322Q6ZN03 302 aaPredicted RBP10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 C19orf35Q6ZS72 473 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 LHFPL1Q86WI0 220 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 TMEM229BQ8NBD8 167 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 UXS1Q8NBZ7 420 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 TERB2Q8NHR7 220 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 SEC22AQ96IW7 307 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 TXN2Q99757 166 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 KLK11Q9UBX7 282 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 NBEAL2Q6ZNJ1 2754 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 TMEM213A2RRL7 107 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 MFSD2BA6NFX1 497 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 GABARAPH6UMI1 98 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 K7EMT4 169 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 TGOLN2O43493 480 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 GPR183P32249 361 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 HSPE1P61604 102 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 ERHP84090 104 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 RAB2BQ8WUD1 216 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 ABHD1Q96SE0 405 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 HINT2Q9BX68 163 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 C5orf66Q9H5L9 145 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 C21orf62Q9NYP8 219 aa10.96□□□□□ -0.65
NIF3L1-205ENST00000409588 OR11H12B2RN74 326 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 NDUFA4O00483 81 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 CD74P04233 296 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 CD3DP04234 171 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 FCGR2BP31994 310 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 TMBIM6P55061 237 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 MEF2DQ14814 521 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 GUCA2BQ16661 112 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 LAMTOR1Q6IAA8 161 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 RBPMS2Q6ZRY4 209 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 CCDC71LQ8N9Z2 235 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 ZNF114Q8NC26 417 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 OR52I2Q8NH67 350 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 SCARB1Q8WTV0 552 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 NAA50Q9GZZ1 169 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 NSG2Q9Y328 171 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 S4R3C0 116 aa10.95□□□□□ -0.66
NIF3L1-205ENST00000409588 INS-IGF2F8WCM5 200 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 M0QYG6 137 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 RGS5O15539 181 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 LYL1P12980 280 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 PGAM2P15259 253 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 PIGPP57054 158 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 PRCDQ00LT1 54 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 RELQ04864 619 aaPredicted RBP10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 OR2C3Q8N628 320 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 IL17DQ8TAD2 202 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 ISOC1Q96CN7 298 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 DAZ1Q9NQZ3 744 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 COPZ2Q9P299 210 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 CACFD1Q9UGQ2 172 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 CEPT1Q9Y6K0 416 aa10.94□□□□□ -0.66
NIF3L1-205ENST00000409588 C3orf85A0A1B0GTC6 90 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 OR2T8A6NH00 312 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 C15orf62A8K5M9 175 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 CTDSPLO15194 276 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 RAB3DO95716 219 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 SUB1P53999 127 aaKnown RBP eCLIP10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 SURF2Q15527 256 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 TM4SF20Q53R12 229 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 CASC10Q5T4H9 136 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 STEAP1BQ6NZ63 245 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 TMEM61Q8N0U2 210 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 OR52B4Q8NGK2 314 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 TMEM190Q8WZ59 177 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 WDR89Q96FK6 387 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 KRTAP4-8Q9BYQ9 185 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 MLXQ9UH92 298 aa10.93□□□□□ -0.66
NIF3L1-205ENST00000409588 K7EIM0 57 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 NUPL2O15504 423 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 IGKV1-39P01597 117 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 IGKV1D-39P04432 117 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 CD5P06127 495 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 CD7P09564 240 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 SNCAP37840 140 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 MFAP4P55083 255 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 CMC4P56277 68 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 UNQ9165/PRO28630Q6UXU0 137 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 Q8N3U1 123 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 MRGPRFQ96AM1 343 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 PLEKHA3Q9HB20 300 aa10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 KMT2CQ8NEZ4 4911 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-205ENST00000409588 DISC1C4P0D8 188 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 CORTO00230 105 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 TSPAN4O14817 238 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 CTSDP07339 412 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 CTSGP08311 255 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 RPL5P46777 297 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 MFAP2P55001 183 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 Q56UQ5 140 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 FAM219AQ8IW50 185 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 DEFB125Q8N687 156 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 RRNAD1Q96FB5 475 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms