RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 MGAQ8IWI9 3026 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
NUP50-203ENST00000407019 CUL9Q8IWT3 2517 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 ACTL6BO94805 426 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 RPL8P62917 257 aaKnown RBP13.68□□□□□ -0.22
NUP50-203ENST00000407019 FOXC1Q12948 553 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 GAMTQ14353 236 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 ACTL10Q5JWF8 245 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 PDPNQ86YL7 162 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 OR10W1Q8NGF6 305 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 BTF3L4Q96K17 158 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 UHRF2Q96PU4 802 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 CHODLQ9H9P2 273 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 NDUFA4L2Q9NRX3 87 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 CTSZQ9UBR2 303 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 SHISA9B4DS77 424 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 DVL1O14640 695 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 IGHV2-70P01814 119 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 USF1P22415 310 aaPredicted RBP13.68□□□□□ -0.22
NUP50-203ENST00000407019 OR10J1P30954 320 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 RBPJQ06330 500 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 CD69Q07108 199 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 LINC00311Q8N616 119 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 OR4A5Q8NH83 315 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 ZNF596Q8TC21 504 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 TMEM186Q96B77 213 aa13.68□□□□□ -0.22
NUP50-203ENST00000407019 IGKV1OR2-108A0A075B7D4 117 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 E7EQL1 145 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 DLL1O00548 723 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 LOXP28300 417 aaPredicted RBP13.67□□□□□ -0.22
NUP50-203ENST00000407019 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
NUP50-203ENST00000407019 DMRTC2Q8IXT2 367 aaPredicted RBP13.67□□□□□ -0.22
NUP50-203ENST00000407019 OR4C13Q8NGP0 309 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 OR1P1Q8NH06 330 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 VSTM2AQ8TAG5 236 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 DMRT1Q9Y5R6 373 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 ARL2-SNX15V9GYD0 113 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 AREGP15514 252 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 IL3RAP26951 378 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 TMEM167AQ8TBQ9 72 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 ACY3Q96HD9 319 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 PACRGQ96M98 296 aaPredicted RBP13.67□□□□□ -0.22
NUP50-203ENST00000407019 HIST1H2BLQ99880 126 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 TMEM167BQ9NRX6 74 aa13.67□□□□□ -0.22
NUP50-203ENST00000407019 TECRQ9NZ01 308 aaKnown RBP13.67□□□□□ -0.22
NUP50-203ENST00000407019 A0A1W2PN81 502 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 XKRY2A2RUG3 117 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 INS-IGF2F8WCM5 200 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 COL8A2P25067 703 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 FOXL1Q12952 345 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 PSG5Q15238 335 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 COA6Q5JTJ3 125 aaKnown RBP13.66□□□□□ -0.22
NUP50-203ENST00000407019 OCC1Q8TAD7 63 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 KAAG1Q9UBP8 84 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 WASHC3Q9Y3C0 194 aa13.66□□□□□ -0.22
NUP50-203ENST00000407019 K7ENP7 123 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 DLX6P56179 175 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 DIAPH2-AS1Q14236 149 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 MLANAQ16655 118 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 PNKDQ8N490 385 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 OR9G1Q8NH87 305 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 CACNG8Q8WXS5 425 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 ST6GALNAC6Q969X2 333 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 PFDN5Q99471 154 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 C19orf24Q9BVV8 132 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 ZFHX2Q9C0A1 2572 aaPredicted RBP13.65□□□□□ -0.22
NUP50-203ENST00000407019 A0A0U1RQK1 487 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 ZNF320A2RRD8 509 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 OR5G3P0C626 314 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 HNF1AP20823 631 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 GATA2P23769 480 aaPredicted RBP13.65□□□□□ -0.22
NUP50-203ENST00000407019 ZNF137PP52743 207 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 TMEM155Q4W5P6 130 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 CDPF1Q6NVV7 123 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 TEX38Q6PEX7 206 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 OR10G8Q8NGN5 311 aa13.65□□□□□ -0.22
NUP50-203ENST00000407019 A0A087X0M5 115 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 A0A1B0GX30 115 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 C9JCJ5 164 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
NUP50-203ENST00000407019 TAS2R45P59539 299 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 PQLC2Q6ZP29 291 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 TGIF2LXQ8IUE1 241 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 SGMS2Q8NHU3 365 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 TMEM37Q8WXS4 190 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 LY96Q9Y6Y9 160 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
NUP50-203ENST00000407019 ZGRF1Q86YA3 2104 aa13.64□□□□□ -0.23
NUP50-203ENST00000407019 RP1L1Q8IWN7 2480 aaPredicted RBP13.64□□□□□ -0.23
NUP50-203ENST00000407019 IGHV1-69-2A0A0G2JMI3 117 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 DNLZQ5SXM8 178 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 VKORC1Q9BQB6 163 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 E7EUB6 86 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 OR7C2O60412 319 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 IGLV2-23P01705 113 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 IGHV1-8P0DP01 117 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 APOBEC3AP31941 199 aaPredicted RBP13.63□□□□□ -0.23
NUP50-203ENST00000407019 PDLIM4P50479 330 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms