RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ZNF343Q6P1L6 599 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 HEPN1Q6WQI6 88 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 DNM1P46Q6ZS02 220 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 OOSP2Q86WS3 158 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 LINC00337Q8N6G1 96 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 ZNF519Q8TB69 540 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 CIB3Q96Q77 187 aaPredicted RBP5.18□□□□□ -1.58
SMCO1-201ENST00000397537 OR4K3Q96R72 315 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 MGLLQ99685 303 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 EBPLQ9BY08 206 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 OR51I2Q9H344 312 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 RPS10P5Q9NQ39 176 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 ZNF586Q9NXT0 402 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 MCTS1Q9ULC4 181 aaKnown RBP5.18□□□□□ -1.58
SMCO1-201ENST00000397537 NEUROG3Q9Y4Z2 214 aa5.18□□□□□ -1.58
SMCO1-201ENST00000397537 SHROOM3Q8TF72 1996 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 NOTCH2Q04721 2471 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 FBN3Q75N90 2809 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 A0A087WUU8 490 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 PROP1O75360 226 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 CSN2P05814 226 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 SOD3P08294 240 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 CD14P08571 375 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 OR4Q2P0C623 313 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 NFYBP25208 207 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 ZNF138P52744 262 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 PYDC2Q56P42 97 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 STPG1Q5TH74 334 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 C20orf196Q8IYI0 205 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 FAM24BQ8N5W8 94 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 METTL27Q8N6F8 245 aaPredicted RBP5.17□□□□□ -1.58
SMCO1-201ENST00000397537 FER1L6-AS1Q8NA97 138 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 DUSP21Q9H596 190 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 LAMTOR2Q9Y2Q5 125 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 SLC25A15Q9Y619 301 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 COL12A1Q99715 3063 aa5.17□□□□□ -1.58
SMCO1-201ENST00000397537 FOCADQ5VW36 1801 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 A0A1W2PRS3 328 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 OTOL1A6NHN0 477 aaPredicted RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 E7EQ34 232 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 ZFAND5O76080 213 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 NRASP01111 189 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 IGLV2-14P01704 120 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 IGHMP01871 453 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 OR12D1P0DN82 309 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 PGAM2P15259 253 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 NPY1RP25929 384 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 TGFBR1P36897 503 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 SNCAP37840 140 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 RPS10P46783 165 aaKnown RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 POLR2HP52434 150 aaKnown RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 RPS24P62847 133 aaKnown RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 BTG2P78543 158 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 PAX8Q06710 450 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 KIAA0087Q14695 138 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 Q499Y3 187 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 CENPWQ5EE01 88 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 DEFB125Q8N687 156 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 LMO3Q8TAP4 145 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 SH3BGRL3Q9H299 93 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 PARLQ9H300 379 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 POPDC3Q9HBV1 291 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 TAS2R8Q9NYW2 309 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HS3ST2Q9Y278 367 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 CREBBPQ92793 2442 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 MIA3Q5JRA6 1907 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 PLXNA4Q9HCM2 1894 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 KIAA1671Q9BY89 1806 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 IGKV1-8A0A0C4DH67 115 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 A0A1B0GX51 115 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 DHRS12A0PJE2 317 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 PRAC2D3DTV9 90 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 SAP18O00422 153 aaKnown RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BKO60814 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BJP06899 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 DBIP07108 87 aaKnown RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HOXB6P17509 224 aaKnown RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BOP23527 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 ATP6V0CP27449 155 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BBP33778 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 NCBP2P52298 156 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BDP58876 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BCP62807 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 CRADDP78560 199 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H1AQ02539 215 aaPredicted RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 RUNX3Q13761 415 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST2H2BEQ16778 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 C6orf99Q4VX62 202 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 COA6Q5JTJ3 125 aaKnown RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 TMEM179BQ7Z7N9 219 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 OR11H6Q8NGC7 330 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BHQ93079 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 TMEM106AQ96A25 262 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BNQ99877 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 HIST1H2BMQ99879 126 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 ADAT1Q9BUB4 502 aaKnown RBP5.16□□□□□ -1.58
SMCO1-201ENST00000397537 C19orf24Q9BVV8 132 aa5.16□□□□□ -1.58
SMCO1-201ENST00000397537 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms