RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 IL34Q6ZMJ4 242 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 ORMDL3Q8N138 153 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 OR10D4PQ8NGN7 298 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 MRPL30Q8TCC3 161 aaKnown RBP3.48□□□□□ -1.85
GABPB1-204ENST00000396464 MAL2Q969L2 176 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 C14orf144Q96I85 54 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 TRIB3Q96RU7 358 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 OPRPNQ99935 248 aaPredicted RBP3.48□□□□□ -1.85
GABPB1-204ENST00000396464 DEFB126Q9BYW3 111 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 SMIM3Q9BZL3 60 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 LAMTOR3Q9UHA4 124 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 HEY1Q9Y5J3 304 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 PLCH1Q4KWH8 1693 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 ALS2Q96Q42 1657 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 FAM208AQ9UK61 1670 aaKnown RBP3.48□□□□□ -1.85
GABPB1-204ENST00000396464 MED1Q15648 1581 aaPredicted RBP3.48□□□□□ -1.85
GABPB1-204ENST00000396464 COL16A1Q07092 1604 aaPredicted RBP3.48□□□□□ -1.85
GABPB1-204ENST00000396464 PIKFYVEQ9Y2I7 2098 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 OVOS2A0A0J9YW53 1432 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 OVOS2Q6IE36 1432 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 IGHV5-51A0A0C4DH38 117 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 IGHV5-10-1A0A0J9YXX1 117 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 A0A1B0GW64 132 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 H0YJW9 148 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 GNG7O60262 68 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 INSP01308 110 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 SMIM6P0DI80 62 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 KDELR1P24390 212 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 CCR2P41597 374 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 LPAR6P43657 344 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
GABPB1-204ENST00000396464 TAS2R30P59541 319 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 RPS11P62280 158 aaKnown RBP eCLIP3.47□□□□□ -1.85
GABPB1-204ENST00000396464 HBA1P69905 142 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 HOXC5Q00444 222 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 Q1RN00 199 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 FKBP1CQ5VVH2 108 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 GPHB5Q86YW7 130 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 CEND1Q8N111 149 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 SUMF2Q8NBJ7 301 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 TP53RKQ96S44 253 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 TM2D3Q9BRN9 247 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 HDHD3Q9BSH5 251 aaPredicted RBP3.47□□□□□ -1.85
GABPB1-204ENST00000396464 PCTPQ9UKL6 214 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 ERG28Q9UKR5 140 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 LAMTOR2Q9Y2Q5 125 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 CSAG2Q9Y5P2 127 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 RGPD5Q99666 1765 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 SPEF2Q9C093 1822 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 MED23Q9ULK4 1368 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 USP54Q70EL1 1684 aa3.47□□□□□ -1.85
GABPB1-204ENST00000396464 PARP4Q9UKK3 1724 aaKnown RBP3.47□□□□□ -1.85
GABPB1-204ENST00000396464 PXDNQ92626 1479 aa3.46□□□□□ -1.85
GABPB1-204ENST00000396464 CD163L1Q9NR16 1453 aa3.46□□□□□ -1.85
GABPB1-204ENST00000396464 SCN2AQ99250 2005 aa3.46□□□□□ -1.85
GABPB1-204ENST00000396464 COL14A1Q05707 1796 aaKnown RBP3.46□□□□□ -1.85
GABPB1-204ENST00000396464 TRAV9-1A0A075B6T8 112 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 IGKV1-12A0A0C4DH73 117 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 IGHV7-4-1A0A0J9YVY3 117 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 DHRS12A0PJE2 317 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 NKX2-6A6NCS4 301 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 DPRXA6NFQ7 191 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 H7BYZ3 331 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 J3QRK9 145 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 K7ERU9 68 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 OVOL1O14753 267 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 IGKV1D-12P01611 117 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 HLA-DQB1P01920 261 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 GIG44P09565 113 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 P0C879 139 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 ZNF705DP0CH99 300 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 EVI2AP22794 236 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 S100A11P31949 105 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 FKBP1AP62942 108 aaKnown RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 ELF3P78545 371 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 SLC38A11Q08AI6 406 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 MORN3Q6PF18 240 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 HAGHLQ6PII5 290 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 RASL11AQ6T310 242 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 PACRGLQ8N7B6 248 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 LINC01006Q8NI28 216 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 TMEM158Q8WZ71 300 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 PEBP4Q96S96 227 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 LXNQ9BS40 222 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 NDFIP1Q9BT67 221 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 IMUPQ9GZP8 106 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 ZNF286AQ9HBT8 521 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 GNG8Q9UK08 70 aa3.46□□□□□ -1.86
GABPB1-204ENST00000396464 IBTKQ9P2D0 1353 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 CPSF1Q10570 1443 aaKnown RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 CDK12Q9NYV4 1490 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-204ENST00000396464 YLPM1P49750 1951 aaKnown RBP3.45□□□□□ -1.86
GABPB1-204ENST00000396464 M0R2Z0 102 aa3.45□□□□□ -1.86
GABPB1-204ENST00000396464 PLA2G10O15496 165 aa3.45□□□□□ -1.86
GABPB1-204ENST00000396464 IGLV3-25P01717 112 aa3.45□□□□□ -1.86
GABPB1-204ENST00000396464 SCTP09683 121 aa3.45□□□□□ -1.86
GABPB1-204ENST00000396464 IGHV1-8P0DP01 117 aa3.45□□□□□ -1.86
GABPB1-204ENST00000396464 BCL2P10415 239 aa3.45□□□□□ -1.86
GABPB1-204ENST00000396464 OPRM1P35372 400 aa3.45□□□□□ -1.86
GABPB1-204ENST00000396464 WNT4P56705 351 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms