RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PINX1Q96BK5 328 aaKnown RBP10.88□□□□□ -0.67
VAPB-202ENST00000395802 PHYHIPLQ96FC7 376 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 SOX21Q9Y651 276 aaPredicted RBP10.88□□□□□ -0.67
VAPB-202ENST00000395802 MDFIC2A0A1B0GVS7 189 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 H3BP45 60 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 FCN1O00602 326 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 TPT1P13693 172 aaKnown RBP10.87□□□□□ -0.67
VAPB-202ENST00000395802 SRD5A1P18405 259 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 NPY1RP25929 384 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 EIF5AP63241 154 aaKnown RBP10.87□□□□□ -0.67
VAPB-202ENST00000395802 CX3CL1P78423 397 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 TMEM14EPQ6UXP3 125 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 BAP18Q8IXM2 172 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 SLC7A5P1Q8MH63 180 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 OR10P1Q8NGE3 313 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 ABHD5Q8WTS1 349 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 HIVEP2P31629 2446 aa10.87□□□□□ -0.67
VAPB-202ENST00000395802 DFFBO76075 338 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 IGHV4-59P01825 116 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 OR13C7P0DN81 318 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 TMEM267Q0VDI3 215 aaPredicted RBP10.86□□□□□ -0.67
VAPB-202ENST00000395802 ZNF266Q14584 549 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 CLLU1Q5K131 121 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 RPL7L1Q6DKI1 246 aaKnown RBP10.86□□□□□ -0.67
VAPB-202ENST00000395802 IL17RELQ6ZVW7 336 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 SMIM3Q9BZL3 60 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 IGHV7-81A0A0B4J1V7 117 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 CORTO00230 105 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
VAPB-202ENST00000395802 IFNA4P05014 189 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 MYOD1P15172 320 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 ATP6V1FQ16864 119 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 C2orf83Q53S99 150 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 STPG2Q8N412 459 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 ZNF114Q8NC26 417 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 OR1S2Q8NGQ3 325 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 WFDC1Q9HC57 220 aa10.86□□□□□ -0.67
VAPB-202ENST00000395802 BORCS7-ASMTA0A0B4J1R7 106 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 E7EUB6 86 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 JTBO76095 146 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 METTL15P1P0C7V9 234 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 TUSC1Q2TAM9 212 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 FBLN7Q53RD9 439 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 C10orf55Q5SWW7 151 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 LILRB2Q8N423 598 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 SIGLECL1Q8N7X8 197 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 UBAC2Q8NBM4 344 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 OR10W1Q8NGF6 305 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 SGMS2Q8NHU3 365 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 ZNF48Q96MX3 618 aaPredicted RBP10.85□□□□□ -0.67
VAPB-202ENST00000395802 GGACTQ9BVM4 153 aa10.85□□□□□ -0.67
VAPB-202ENST00000395802 IGLC7A0M8Q6 106 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 CST7O76096 145 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 NMBP08949 121 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 WT1-ASQ06250 92 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 BSXQ3C1V8 233 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 ETV3LQ6ZN32 361 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 TMEM217Q8N7C4 229 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 OR5C1Q8NGR4 320 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 OR1P1Q8NH06 330 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 RNASEH2CQ8TDP1 164 aaKnown RBP10.84□□□□□ -0.67
VAPB-202ENST00000395802 ZNF418Q8TF45 676 aaPredicted RBP10.84□□□□□ -0.67
VAPB-202ENST00000395802 PCNPQ8WW12 178 aaKnown RBP10.84□□□□□ -0.67
VAPB-202ENST00000395802 SMR3AQ99954 134 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 NPFFR1Q9GZQ6 430 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 TEX22C9J3V5 150 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 DEFA4P12838 97 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 SSBP2P81877 361 aaPredicted RBP10.84□□□□□ -0.67
VAPB-202ENST00000395802 FAM74A1Q5RGS3 127 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 OR8G2PQ6IF36 304 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 OR4C12Q96R67 309 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 JMJD8Q96S16 334 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 ARV1Q9H2C2 271 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 THYN1Q9P016 225 aa10.84□□□□□ -0.67
VAPB-202ENST00000395802 ZFHX3Q15911 3703 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 C15orf62A8K5M9 175 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 NPIPB5A8MRT5 1133 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 CLDN34H7C241 214 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 IGHG2P01859 326 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 RAB14P61106 215 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 AKIRIN2Q53H80 203 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 ETFRF1Q6IPR1 90 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 TTC9CQ8N5M4 171 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 PARP11Q9NR21 331 aa10.83□□□□□ -0.68
VAPB-202ENST00000395802 SONP18583 2426 aaKnown RBP10.83□□□□□ -0.68
VAPB-202ENST00000395802 MXRA5Q9NR99 2828 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 TRIM77I1YAP6 450 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 IFNA5P01569 189 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 AMY1AP04745 511 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 CRYGCP07315 174 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 RNASE2P10153 161 aaKnown RBP10.82□□□□□ -0.68
VAPB-202ENST00000395802 RPL15P61313 204 aaKnown RBP10.82□□□□□ -0.68
VAPB-202ENST00000395802 SLC38A11Q08AI6 406 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 CLINT1Q14677 625 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 EIF5AL1Q6IS14 154 aaKnown RBP10.82□□□□□ -0.68
VAPB-202ENST00000395802 SLC25A24Q6NUK1 477 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 SLC35E3Q7Z769 313 aa10.82□□□□□ -0.68
VAPB-202ENST00000395802 TMED6Q8WW62 240 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms