RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 CCDC71LQ8N9Z2 235 aa18.6■□□□□ 0.57
TNFRSF4-201ENST00000379236 ABHD1Q96SE0 405 aa18.6■□□□□ 0.57
TNFRSF4-201ENST00000379236 COPZ2Q9P299 210 aa18.6■□□□□ 0.57
TNFRSF4-201ENST00000379236 CEPT1Q9Y6K0 416 aa18.6■□□□□ 0.57
TNFRSF4-201ENST00000379236 DNAH7Q8WXX0 4024 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 GABARAPH6UMI1 98 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 RAB3DO95716 219 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 AKR1C2P52895 323 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 ELLP55199 621 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 MRPS10P82664 201 aaKnown RBP18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 SPCS2Q15005 226 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 ANKRD55Q3KP44 614 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 SPSB3Q6PJ21 355 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 UNQ9165/PRO28630Q6UXU0 137 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 RBPMS2Q6ZRY4 209 aaKnown RBP18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 LHFPL1Q86WI0 220 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 TMEM61Q8N0U2 210 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 TMEM229BQ8NBD8 167 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 ZFAND1Q8TCF1 268 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 RAB2BQ8WUD1 216 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 MRPL27Q9P0M9 148 aaKnown RBP18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 MLXQ9UH92 298 aa18.59■□□□□ 0.57
TNFRSF4-201ENST00000379236 DBX1A6NMT0 343 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 OR11H12B2RN74 326 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 SCAF4O95104 1147 aaKnown RBP18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 DEFB125Q8N687 156 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 OR52B4Q8NGK2 314 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 OR1P1Q8NH06 330 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 SCARB1Q8WTV0 552 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 ISOC1Q96CN7 298 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 MISP3Q96FF7 219 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 CITED4Q96RK1 184 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 ATP6V0BQ99437 205 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 ZNF436Q9C0F3 470 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 SRD5A3Q9H8P0 318 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 GAR1Q9NY12 217 aaKnown RBP18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 NBEAL2Q6ZNJ1 2754 aa18.58■□□□□ 0.56
TNFRSF4-201ENST00000379236 IGKV1-39P01597 117 aa18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 IGKV1D-39P04432 117 aa18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 MFAP2P55001 183 aa18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 ERHP84090 104 aaKnown RBP18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 PRCDQ00LT1 54 aa18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 SSBP1Q04837 148 aaKnown RBP18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 TRIM16LQ309B1 348 aa18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 STEAP1BQ6NZ63 245 aa18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 RNASE11Q8TAA1 199 aaKnown RBP18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 PDCD10Q9BUL8 212 aa18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 MIXL1Q9H2W2 232 aa18.57■□□□□ 0.56
TNFRSF4-201ENST00000379236 C3orf85A0A1B0GTC6 90 aa18.56■□□□□ 0.56
TNFRSF4-201ENST00000379236 CTDSP2O14595 271 aa18.56■□□□□ 0.56
TNFRSF4-201ENST00000379236 LYL1P12980 280 aa18.56■□□□□ 0.56
TNFRSF4-201ENST00000379236 HSPE1P61604 102 aaKnown RBP18.56■□□□□ 0.56
TNFRSF4-201ENST00000379236 IL18Q14116 193 aa18.56■□□□□ 0.56
TNFRSF4-201ENST00000379236 TERB2Q8NHR7 220 aa18.56■□□□□ 0.56
TNFRSF4-201ENST00000379236 TMEM190Q8WZ59 177 aa18.56■□□□□ 0.56
TNFRSF4-201ENST00000379236 C20orf24Q9BUV8 137 aa18.56■□□□□ 0.56
TNFRSF4-201ENST00000379236 TRAV25A0A0B4J276 109 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 CD74P04233 296 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 MEF2DQ14814 521 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 OR2C3Q8N628 320 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 SLC35G3Q8N808 338 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 OR4D10Q8NGI6 311 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 DIRAS2Q96HU8 199 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 TP53RKQ96S44 253 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 BCL7BQ9BQE9 202 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 WFDC10AQ9H1F0 79 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 DAZ1Q9NQZ3 744 aaKnown RBP18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 RABL2AQ9UBK7 228 aaPredicted RBP18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 RABL2BQ9UNT1 228 aa18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 C14orf166Q9Y224 244 aaKnown RBP18.55■□□□□ 0.56
TNFRSF4-201ENST00000379236 DISC1C4P0D8 188 aa18.54■□□□□ 0.56
TNFRSF4-201ENST00000379236 K7EIM0 57 aa18.54■□□□□ 0.56
TNFRSF4-201ENST00000379236 NDUFA4O00483 81 aa18.54■□□□□ 0.56
TNFRSF4-201ENST00000379236 TMBIM6P55061 237 aa18.54■□□□□ 0.56
TNFRSF4-201ENST00000379236 OR13C8Q8NGS7 320 aa18.54■□□□□ 0.56
TNFRSF4-201ENST00000379236 MARCH1Q8TCQ1 289 aa18.54■□□□□ 0.56
TNFRSF4-201ENST00000379236 CCDC59Q9P031 241 aaKnown RBP18.54■□□□□ 0.56
TNFRSF4-201ENST00000379236 NUPL2O15504 423 aaKnown RBP18.53■□□□□ 0.56
TNFRSF4-201ENST00000379236 C8orf88P0DMB2 117 aa18.53■□□□□ 0.56
TNFRSF4-201ENST00000379236 MFAP4P55083 255 aa18.53■□□□□ 0.56
TNFRSF4-201ENST00000379236 RELQ04864 619 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF4-201ENST00000379236 CASC10Q5T4H9 136 aa18.53■□□□□ 0.56
TNFRSF4-201ENST00000379236 PINX1Q96BK5 328 aaKnown RBP18.53■□□□□ 0.56
TNFRSF4-201ENST00000379236 RRNAD1Q96FB5 475 aaKnown RBP18.53■□□□□ 0.56
TNFRSF4-201ENST00000379236 C6orf62Q9GZU0 229 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF4-201ENST00000379236 B3GALNT1O75752 331 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 IFNA17P01571 189 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 SNCAP37840 140 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 SPINK9Q5DT21 86 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 LAMTOR1Q6IAA8 161 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 ZNF114Q8NC26 417 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 SMIM4Q8WVI0 70 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 CHRDL1Q9BU40 450 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 ENY2Q9NPA8 101 aa18.52■□□□□ 0.56
TNFRSF4-201ENST00000379236 CTSDP07339 412 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF4-201ENST00000379236 IZUMO4Q1ZYL8 232 aa18.51■□□□□ 0.55
TNFRSF4-201ENST00000379236 SP6Q3SY56 376 aa18.51■□□□□ 0.55
TNFRSF4-201ENST00000379236 FAAP20Q6NZ36 180 aa18.51■□□□□ 0.55
TNFRSF4-201ENST00000379236 MT-CO2P00403 227 aa18.5■□□□□ 0.55
TNFRSF4-201ENST00000379236 IGKV1-5P01602 117 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms