RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SLA2Q9H6Q3 261 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 NOTCH1P46531 2555 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 PF4P02776 101 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 SULT1A3P0DMM9 295 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 SULT1A4P0DMN0 295 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 CTRB1P17538 263 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 CTRB2Q6GPI1 263 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 CADM3Q8N126 398 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 COQ8AQ8NI60 647 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 PLEKHA3Q9HB20 300 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 ZNF257Q9Y2Q1 563 aa9.1□□□□□ -0.95
DEPDC4-202ENST00000378244 IGHV3-21A0A0B4J1V1 117 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 ANKRD34BA5PLL1 514 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 NPIPB5A8MRT5 1133 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 IGHV3-23P01764 117 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 SPNP16150 400 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 HOXA1P49639 335 aaPredicted RBP9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 PRCDQ00LT1 54 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 C11orf87Q6NUJ2 197 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 OR4F17Q8NGA8 305 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 OR4F4Q96R69 305 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 C13orf42A0A1B0GVH6 325 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 DHFRP00374 187 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 FGF2P09038 288 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 SMCO1Q147U7 214 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 C15orf32Q32M92 178 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 GGNBP1Q5YKI7 109 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 SLC25A24Q6NUK1 477 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 LRTM2Q8N967 370 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 DUSP18Q8NEJ0 188 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 OR1S1Q8NH92 325 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 MYOZ3Q8TDC0 251 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 RAX2Q96IS3 184 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 FANCD2OSQ96PS1 177 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 FBXL7Q9UJT9 491 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 DMRT1Q9Y5R6 373 aa9.09□□□□□ -0.95
DEPDC4-202ENST00000378244 CEBPZOSA8MTT3 80 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 INMT-MINDY4F8WBC2 141 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 CCSO14618 274 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 CRYGCP07315 174 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 THOC7Q6I9Y2 204 aaKnown RBP9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 C4orf3Q8WVX3 66 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 TMED3Q9Y3Q3 217 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 CCL24O00175 119 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 NDUFB8O95169 186 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 IGHV3-48P01763 117 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 SNCAP37840 140 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 MFAP2P55001 183 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 ZNF431Q8TF32 576 aaPredicted RBP9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 MITD1Q8WV92 249 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 PINX1Q96BK5 328 aaKnown RBP9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 ENY2Q9NPA8 101 aa9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 HEYLQ9NQ87 328 aaPredicted RBP9.08□□□□□ -0.96
DEPDC4-202ENST00000378244 TRBV9A0A0B4J1U6 114 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 A0A0G2JLM5 398 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 H3BUA1 57 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 I3L521 148 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 TRBV12-3P01733 135 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 ERHP84090 104 aaKnown RBP9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 ATP5G2Q06055 141 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 HSD17B13Q7Z5P4 300 aaPredicted RBP9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 NECAP1Q8NC96 275 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 P2RX4Q99571 388 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 MAGT1Q9H0U3 335 aa9.07□□□□□ -0.96
DEPDC4-202ENST00000378244 A0A1B0GU03 582 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 MFSD2BA6NFX1 497 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 IFNA21P01568 189 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 SPCS3P61009 180 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 TNFRSF9Q07011 255 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 ETV3LQ6ZN32 361 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 OR2C3Q8N628 320 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 MISP3Q96FF7 219 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 SRSF8Q9BRL6 282 aaKnown RBP9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 ZC4H2Q9NQZ6 224 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 GSKIPQ9P0R6 139 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 F11RQ9Y624 299 aaKnown RBP9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 IGLV11-55A0A075B6I3 123 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 IGHV4OR15-8A0A075B7B6 117 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 A0A087WW49 117 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 DUXBA0A1W2PPF3 345 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 LGALS1P09382 135 aaKnown RBP9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 DCTN2Q13561 401 aaKnown RBP9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 EXOSC2Q13868 293 aaKnown RBP9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 PRR31Q5SQ13 230 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 C12orf45Q8N5I9 185 aaPredicted RBP9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 OR1N2Q8NGR9 330 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 DPF1Q92782 380 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 OR10C1Q96KK4 312 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 MARVELD1Q9BSK0 173 aa9.06□□□□□ -0.96
DEPDC4-202ENST00000378244 PIGBOS1A0A0B4J2F0 54 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 FAM223BA6NKX1 122 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 FAM223AQ8IWN6 122 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 MRPL41Q8IXM3 137 aaKnown RBP9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 UBAC2Q8NBM4 344 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 USMG5Q96IX5 58 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 SLURP1P55000 103 aa9.05□□□□□ -0.96
DEPDC4-202ENST00000378244 ZNF616Q08AN1 781 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms