RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 FCN1O00602 326 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 IL6RP08887 468 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-202ENST00000377797 CD24P25063 80 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 GATAD1Q8WUU5 269 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 MOSP00540 346 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 IGFBP2P18065 325 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 WFDC1Q9HC57 220 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 CHD7Q9P2D1 2997 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 LINC00473A8K010 186 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 SLC31A2O15432 143 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 CAMPP49913 170 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 RPEL1Q2QD12 228 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 C3orf36Q3SXR2 165 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 VPS25Q9BRG1 176 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 ATRXP46100 2492 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 A8MXK9 166 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 S100A4P26447 101 aaKnown RBP11.98□□□□□ -0.49
TCOF1-202ENST00000377797 COTL1Q14019 142 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 WDR25Q64LD2 544 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-202ENST00000377797 LYPD2Q6UXB3 125 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 SLX1AQ9BQ83 275 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 OR51G1Q8NGK1 321 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 MS4A10Q96PG2 267 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 IGHV3-35A0A0C4DH35 117 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 COL8A2P25067 703 aa11.98□□□□□ -0.49
TCOF1-202ENST00000377797 RANBP2P49792 3224 aaKnown RBP11.98□□□□□ -0.49
TCOF1-202ENST00000377797 IGHV1-8P0DP01 117 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 COL8A1P27658 744 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 SRSF4Q08170 494 aaKnown RBP11.97□□□□□ -0.49
TCOF1-202ENST00000377797 RRHO14718 337 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 LYPD6Q86Y78 171 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 A0A0G2JRQ6 117 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 PGPA6NDG6 321 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 BPIFA4PQ86YQ2 179 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 CYTL1Q9NRR1 136 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 IGLV3-9A0A075B6K5 115 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 FCGR2BP31994 310 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-202ENST00000377797 C7orf69Q9H7B7 122 aa11.97□□□□□ -0.49
TCOF1-202ENST00000377797 KIAA1324LA8MWY0 1029 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-202ENST00000377797 PPP1R27Q86WC6 154 aa11.96□□□□□ -0.49
TCOF1-202ENST00000377797 SGMS2Q8NHU3 365 aa11.96□□□□□ -0.49
TCOF1-202ENST00000377797 C19orf24Q9BVV8 132 aa11.96□□□□□ -0.49
TCOF1-202ENST00000377797 EML6Q6ZMW3 1958 aa11.96□□□□□ -0.49
TCOF1-202ENST00000377797 GATA2P23769 480 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-202ENST00000377797 GATA4P43694 442 aa11.96□□□□□ -0.49
TCOF1-202ENST00000377797 EFNA4P52798 201 aa11.96□□□□□ -0.49
TCOF1-202ENST00000377797 VAMP3Q15836 100 aa11.96□□□□□ -0.49
TCOF1-202ENST00000377797 Q6ZRM9 215 aa11.96□□□□□ -0.49
TCOF1-202ENST00000377797 DNASE2O00115 360 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-202ENST00000377797 KRTDAPP60985 99 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 CYP2G1PQ6ZSU1 146 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 PRO1933Q9H354 126 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 S4R3C0 116 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 HSBP1O75506 76 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 CGAP01215 116 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 GCHFRP30047 84 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 LOXL3P58215 753 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 ZNF506Q5JVG8 444 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 SSC4DQ8WTU2 575 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 CACNG8Q8WXS5 425 aa11.96□□□□□ -0.5
TCOF1-202ENST00000377797 IGHV2-26A0A0B4J1V2 119 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 LOC102723971A0A1B0GUV8 181 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 H3BTX0 84 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 TIMM23O14925 209 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 P01737 135 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 TNFRSF14Q92956 283 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 EAF1Q96JC9 268 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-202ENST00000377797 PARLQ9H300 379 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 FGF16O43320 207 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 OR51M1Q9H341 326 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 ELOA3CA0A087WX78 387 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-202ENST00000377797 FAM53AQ6NSI3 398 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-202ENST00000377797 SRSF12Q8WXF0 261 aaKnown RBP11.95□□□□□ -0.5
TCOF1-202ENST00000377797 FGF23Q9GZV9 251 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-202ENST00000377797 TRAV30A0A087WSZ9 112 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 CRYBB3P26998 211 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 PRCDQ00LT1 54 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 C10orf55Q5SWW7 151 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 TMEM144Q7Z5S9 345 aa11.95□□□□□ -0.5
TCOF1-202ENST00000377797 HIST1H1BP16401 226 aaKnown RBP11.94□□□□□ -0.5
TCOF1-202ENST00000377797 IQCJQ1A5X6 159 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 ZNF585BQ52M93 769 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
TCOF1-202ENST00000377797 LINC00518Q8N0U6 118 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 Q8NFD4 153 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 CLEC5AQ9NY25 188 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 AP4M1O00189 453 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 NBR2O15453 112 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 OR2J3O76001 311 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 PAX6P26367 422 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 Q6ZSR3 168 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 FAM90A9PA6NNJ1 464 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 TMEM250H0YL14 139 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 IL4P05112 153 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 TPPP2P59282 170 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 ZNF383Q8NA42 475 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 MDKP21741 143 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-202ENST00000377797 CFHR2P36980 270 aa11.94□□□□□ -0.5
TCOF1-202ENST00000377797 KRTAP27-1Q3LI81 207 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms