RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 STAG3L3P0CL85 134 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 DIAPH2-AS1Q14236 149 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 HCP5Q6MZN7 132 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
USP11-204ENST00000377107 SNURFLB1AK76 121 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 MPDU1O75352 247 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 APOA2P02652 100 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 SAA1P0DJI8 122 aaPredicted RBP10.6□□□□□ -0.71
USP11-204ENST00000377107 ADMP35318 185 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 SSTP61278 116 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 C14orf144Q96I85 54 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 SSBP3Q9BWW4 388 aaPredicted RBP10.6□□□□□ -0.71
USP11-204ENST00000377107 SAP30LQ9HAJ7 183 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 hADV38S2A0JD32 116 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 NKX6-3A6NJ46 265 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 NUPR1O60356 82 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 SRP14P37108 136 aaKnown RBP10.59□□□□□ -0.71
USP11-204ENST00000377107 GUSBP1Q15486 140 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 OR1L6Q8NGR2 347 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 ZCCHC14Q8WYQ9 949 aaKnown RBP10.59□□□□□ -0.71
USP11-204ENST00000377107 NAT8BQ9UHF3 227 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 TRAV34A0A0B4J273 112 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 VENTXO95231 258 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 ORM2P19652 201 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 TMEM108Q6UXF1 575 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 TOMM20LQ6UXN7 152 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 ZNF705AQ6ZN79 300 aaPredicted RBP10.59□□□□□ -0.71
USP11-204ENST00000377107 LINC00479Q96M42 142 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 TIMM8BQ9Y5J9 83 aaPredicted RBP10.59□□□□□ -0.71
USP11-204ENST00000377107 KALRNO60229 2985 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 ZNF292O60281 2723 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 PRRG2O14669 202 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 SSX2Q16385 188 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 TIGITQ495A1 244 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 CENPWQ5EE01 88 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 ZNF664Q8N3J9 261 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 FKBP11Q9NYL4 201 aa10.59□□□□□ -0.71
USP11-204ENST00000377107 ANKHD1Q8IWZ3 2542 aaKnown RBP10.59□□□□□ -0.71
USP11-204ENST00000377107 PAX5Q02548 391 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 Q8N7P7 452 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 RBMXL3Q8N7X1 1067 aaKnown RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 GAFA1Q96PS6 74 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 LYNX1G3V0Z9 82 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 SLC25A17O43808 307 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 CT45A6P0DMU7 189 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 CT45A5P0DMU8 189 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 CT45A7P0DMV0 189 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 LYNX1P0DP58 116 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 CRISP2P16562 243 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 KIR2DS2P43631 304 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 UBE2L3P68036 154 aaKnown RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 TEX38Q6PEX7 206 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 C19orf35Q6ZS72 473 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 LINC00469Q8N7U9 141 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 MISP3Q96FF7 219 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 SLC35E1Q96K37 410 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 RAB9BQ9NP90 201 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 CBLN4Q9NTU7 201 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 PRNDQ9UKY0 176 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 MBD3L4A6NDZ8 208 aaPredicted RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 MBD3L3A6NE82 208 aaPredicted RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 MBD3L5A6NJ08 208 aaPredicted RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 F2RL2O00254 374 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 PMCHP20382 165 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 NTF3P20783 257 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 RPL29P47914 159 aaKnown RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 ERHP84090 104 aaKnown RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 BSPH1Q075Z2 132 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 JOSD1Q15040 202 aaPredicted RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 GFRALQ6UXV0 394 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 MBD3L2Q8NHZ7 208 aaPredicted RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 CMTM2Q8TAZ6 248 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 ATG101Q9BSB4 218 aa10.58□□□□□ -0.72
USP11-204ENST00000377107 MRPL18Q9H0U6 180 aaKnown RBP10.58□□□□□ -0.72
USP11-204ENST00000377107 PYYP10082 97 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 KRTDAPP60985 99 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 VWC2Q2TAL6 325 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 NPIPB3Q92617 1050 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 NEUROG1Q92886 237 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 TEX50A0A1B0GTY4 177 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 GGCTO75223 188 aaKnown RBP10.57□□□□□ -0.72
USP11-204ENST00000377107 TNFRSF1AP19438 455 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 ACTL10Q5JWF8 245 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 FLYWCH2Q96CP2 140 aaKnown RBP10.57□□□□□ -0.72
USP11-204ENST00000377107 C16orf97H3BN30 126 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 COX7A2P2O60397 106 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 LGALS4P56470 323 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 RANP62826 216 aaKnown RBP10.57□□□□□ -0.72
USP11-204ENST00000377107 LYPD2Q6UXB3 125 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 MMD2Q8IY49 270 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 SLC45A2Q9UMX9 530 aa10.57□□□□□ -0.72
USP11-204ENST00000377107 PTPRQQ9UMZ3 2332 aa10.56□□□□□ -0.72
USP11-204ENST00000377107 MOSP00540 346 aa10.56□□□□□ -0.72
USP11-204ENST00000377107 LINC00869P0C866 280 aa10.56□□□□□ -0.72
USP11-204ENST00000377107 TBX15Q96SF7 602 aa10.56□□□□□ -0.72
USP11-204ENST00000377107 TUBG2Q9NRH3 451 aa10.56□□□□□ -0.72
USP11-204ENST00000377107 ELOVL5Q9NYP7 299 aa10.56□□□□□ -0.72
USP11-204ENST00000377107 PAM16Q9Y3D7 125 aa10.56□□□□□ -0.72
USP11-204ENST00000377107 DYSFO75923 2080 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms