RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CEBPDP49716 269 aaPredicted RBP10.05□□□□□ -0.8
VRK3-202ENST00000377011 PSMB3P49720 205 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 SSX7Q7RTT5 188 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 H2BFWTQ7Z2G1 175 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 RPP25LQ8N5L8 163 aaKnown RBP10.05□□□□□ -0.8
VRK3-202ENST00000377011 OR8B3Q8NGG8 313 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 DTD1Q8TEA8 209 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 OR8B2Q96RD0 313 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 PYGO2Q9BRQ0 406 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 SRD5A3Q9H8P0 318 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 IGHV2-70DA0A0C4DH43 119 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 SMCO3A2RU48 225 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 DVL1O14640 695 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 SPINT2O43291 252 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 RAMP3O60896 148 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 S1PR2O95136 353 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 VENTXO95231 258 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 TRGC1P0CF51 173 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 G6PCP35575 357 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 RPL30P62888 115 aaKnown RBP10.04□□□□□ -0.8
VRK3-202ENST00000377011 PAX8Q06710 450 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 LCE2DQ5TA82 110 aaPredicted RBP10.04□□□□□ -0.8
VRK3-202ENST00000377011 STUMQ69YW2 141 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 OR52L2PQ8NGH6 319 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 OR10D4PQ8NGN7 298 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 CLN8Q9UBY8 286 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 IGKV1D-17A0A075B6S4 117 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 PHOX2AO14813 284 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 TMPRSS2O15393 492 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 RBFOX2O43251 390 aaKnown RBP eCLIP10.04□□□□□ -0.8
VRK3-202ENST00000377011 KRASP01116 189 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 HNF1AP20823 631 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 FGF7P21781 194 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 CFHR2P36980 270 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 GABRA2P47869 451 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 FGF8P55075 233 aaPredicted RBP10.04□□□□□ -0.8
VRK3-202ENST00000377011 ELLP55199 621 aaPredicted RBP10.04□□□□□ -0.8
VRK3-202ENST00000377011 RPP30P78346 268 aaKnown RBP10.04□□□□□ -0.8
VRK3-202ENST00000377011 DEFA6Q01524 100 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 PDLIM3Q53GG5 364 aaPredicted RBP10.04□□□□□ -0.8
VRK3-202ENST00000377011 NCR3LG1Q68D85 454 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 OR8G2PQ6IF36 304 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 ACSM6Q6P461 480 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 ZNF709Q8N972 641 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 OR10A7Q8NGE5 316 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 PPP1R35Q8TAP8 253 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 ABHD5Q8WTS1 349 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 GAFA1Q96PS6 74 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 SMIM7Q9BQ49 75 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 NCOR1P1Q9H4R4 102 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 ESM1Q9NQ30 184 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
VRK3-202ENST00000377011 TRAV38-1A0A0B4J264 116 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 PPIAL4CA0A0B4J2A2 164 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 C17orf98A8MV24 154 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 MPDU1O75352 247 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 IGKV1D-33P01593 117 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 IGKV1-33P01594 117 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 BRWD1-AS2P59051 145 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 AESQ08117 197 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 ZNF816Q0VGE8 651 aaPredicted RBP10.03□□□□□ -0.8
VRK3-202ENST00000377011 OR10G9Q8NGN4 311 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 OR10G7Q8NGN6 311 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 OR52E5Q8NH55 327 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 OR5R1Q8NH85 324 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 UBALD1Q8TB05 177 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 FRZBQ92765 325 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 BTF3L4Q96K17 158 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 ZNF48Q96MX3 618 aaPredicted RBP10.03□□□□□ -0.8
VRK3-202ENST00000377011 RAB9BQ9NP90 201 aa10.03□□□□□ -0.8
VRK3-202ENST00000377011 MDFIC2A0A1B0GVS7 189 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 C15orf65H3BRN8 121 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 ITGB1BP1O14713 200 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 GZMHP20718 246 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 KIR2DS2P43631 304 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 PKIAP61925 76 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 COL10A1Q03692 680 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 ACOT6Q3I5F7 207 aaPredicted RBP10.02□□□□□ -0.8
VRK3-202ENST00000377011 COA6Q5JTJ3 125 aaKnown RBP10.02□□□□□ -0.8
VRK3-202ENST00000377011 CD177Q8N6Q3 437 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 ZNRF1Q8ND25 227 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 RNASEH2CQ8TDP1 164 aaKnown RBP10.02□□□□□ -0.8
VRK3-202ENST00000377011 MRGPRDQ8TDS7 321 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 ANAPC16Q96DE5 110 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 NPCDR1Q9BY65 106 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 GPR61Q9BZJ8 451 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 KAAG1Q9UBP8 84 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 GAB2Q9UQC2 676 aa10.02□□□□□ -0.8
VRK3-202ENST00000377011 J3QLI3 93 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 HPRT1P00492 218 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 PFN1P07737 140 aaKnown RBP10.02□□□□□ -0.81
VRK3-202ENST00000377011 BSXQ3C1V8 233 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 FFAR4Q5NUL3 377 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 RUSC1-AS1Q66K80 236 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 ZNF788Q6ZQV5 615 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 OR5B12Q96R08 314 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms