RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 C22orf34Q6ZV56 151 aa20.65■□□□□ 0.9
C9orf40-201ENST00000376854 TMEM167BQ9NRX6 74 aa20.65■□□□□ 0.9
C9orf40-201ENST00000376854 ARL2-SNX15V9GYD0 113 aa20.65■□□□□ 0.9
C9orf40-201ENST00000376854 ATMQ13315 3056 aa20.65■□□□□ 0.9
C9orf40-201ENST00000376854 IGKV1OR2-108A0A075B7D4 117 aa20.65■□□□□ 0.9
C9orf40-201ENST00000376854 SCGB1D1O95968 90 aa20.65■□□□□ 0.9
C9orf40-201ENST00000376854 IGFL3Q6UXB1 125 aa20.65■□□□□ 0.9
C9orf40-201ENST00000376854 DCAF16Q9NXF7 216 aa20.65■□□□□ 0.9
C9orf40-201ENST00000376854 DSCAML1Q8TD84 2053 aa20.64■□□□□ 0.9
C9orf40-201ENST00000376854 FAM27E3Q08E93 113 aa20.64■□□□□ 0.89
C9orf40-201ENST00000376854 TMEM30BQ3MIR4 351 aa20.64■□□□□ 0.89
C9orf40-201ENST00000376854 TECRQ9NZ01 308 aaKnown RBP20.64■□□□□ 0.89
C9orf40-201ENST00000376854 IRF2P14316 349 aa20.64■□□□□ 0.89
C9orf40-201ENST00000376854 ERVFC1-1P60608 527 aa20.64■□□□□ 0.89
C9orf40-201ENST00000376854 SELENOTP62341 195 aa20.64■□□□□ 0.89
C9orf40-201ENST00000376854 Q6ZS92 163 aa20.64■□□□□ 0.89
C9orf40-201ENST00000376854 RND1Q92730 232 aa20.64■□□□□ 0.89
C9orf40-201ENST00000376854 SLC35E1Q96K37 410 aa20.64■□□□□ 0.89
C9orf40-201ENST00000376854 ANKRD11Q6UB99 2663 aaPredicted RBP20.63■□□□□ 0.89
C9orf40-201ENST00000376854 GATA2P23769 480 aaPredicted RBP20.63■□□□□ 0.89
C9orf40-201ENST00000376854 CRYBB3P26998 211 aa20.63■□□□□ 0.89
C9orf40-201ENST00000376854 OR10J1P30954 320 aa20.63■□□□□ 0.89
C9orf40-201ENST00000376854 OR5I1Q13606 314 aa20.63■□□□□ 0.89
C9orf40-201ENST00000376854 C2orf83Q53S99 150 aa20.63■□□□□ 0.89
C9orf40-201ENST00000376854 CMTM2Q8TAZ6 248 aa20.63■□□□□ 0.89
C9orf40-201ENST00000376854 MS4A10Q96PG2 267 aa20.63■□□□□ 0.89
C9orf40-201ENST00000376854 HELTA6NFD8 242 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 SAA1P0DJI8 122 aaPredicted RBP20.62■□□□□ 0.89
C9orf40-201ENST00000376854 NDUFB7P17568 137 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 CD40P25942 277 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 GNG4P50150 75 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 LGALS4P56470 323 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 RPEL1Q2QD12 228 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 CENPWQ5EE01 88 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 RBMXL3Q8N7X1 1067 aaKnown RBP20.62■□□□□ 0.89
C9orf40-201ENST00000376854 MRPL18Q9H0U6 180 aaKnown RBP20.62■□□□□ 0.89
C9orf40-201ENST00000376854 hADV38S2A0JD32 116 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 SNRPCP09234 159 aaKnown RBP20.62■□□□□ 0.89
C9orf40-201ENST00000376854 RAB4BP61018 213 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 MMD2Q8IY49 270 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 BEND2Q8NDZ0 799 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 OR1L6Q8NGR2 347 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 ZNF503Q96F45 646 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 BET1LQ9NYM9 111 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 BSNQ9UPA5 3926 aa20.62■□□□□ 0.89
C9orf40-201ENST00000376854 TANC2Q9HCD6 1990 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 OR7C2O60412 319 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 TCF15Q12870 199 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 MLANAQ16655 118 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 TEX36Q5VZQ5 186 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 OR5B3Q8NH48 314 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 V9GYV3 84 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 RAI1Q7Z5J4 1906 aaPredicted RBP20.61■□□□□ 0.89
C9orf40-201ENST00000376854 ATP5IP56385 69 aaPredicted RBP20.61■□□□□ 0.89
C9orf40-201ENST00000376854 LBHQ53QV2 105 aaPredicted RBP20.61■□□□□ 0.89
C9orf40-201ENST00000376854 MISP3Q96FF7 219 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 PLCE1Q9P212 2302 aa20.61■□□□□ 0.89
C9orf40-201ENST00000376854 RNASE2P10153 161 aaKnown RBP20.6■□□□□ 0.89
C9orf40-201ENST00000376854 PQLC2Q6ZP29 291 aa20.6■□□□□ 0.89
C9orf40-201ENST00000376854 OR1L8Q8NGR8 309 aa20.6■□□□□ 0.89
C9orf40-201ENST00000376854 C2orf88Q9BSF0 95 aa20.6■□□□□ 0.89
C9orf40-201ENST00000376854 NAGKQ9UJ70 344 aa20.6■□□□□ 0.89
C9orf40-201ENST00000376854 LINC00312Q9Y6C7 94 aa20.6■□□□□ 0.89
C9orf40-201ENST00000376854 OR10W1Q8NGF6 305 aa20.6■□□□□ 0.89
C9orf40-201ENST00000376854 OR9G1Q8NH87 305 aa20.6■□□□□ 0.89
C9orf40-201ENST00000376854 TP53TG3Q9ULZ0 132 aa20.6■□□□□ 0.89
C9orf40-201ENST00000376854 FCN1O00602 326 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 OR5G3P0C626 314 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 CRISP2P16562 243 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 IER3P46695 156 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 CCL8P80075 99 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 USF2Q15853 346 aaPredicted RBP20.59■□□□□ 0.89
C9orf40-201ENST00000376854 KRTCAP3Q53RY4 240 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 ZNF833PQ6ZTB9 187 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 OR10J4P0C629 311 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 RNF224P0DH78 156 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 TAS2R45P59539 299 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 TAS2R60P59551 318 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 C19orf24Q9BVV8 132 aa20.59■□□□□ 0.89
C9orf40-201ENST00000376854 MRPL20Q9BYC9 149 aaKnown RBP20.59■□□□□ 0.89
C9orf40-201ENST00000376854 KLK10O43240 276 aa20.58■□□□□ 0.89
C9orf40-201ENST00000376854 GVINP1Q7Z2Y8 2422 aa20.58■□□□□ 0.89
C9orf40-201ENST00000376854 NKX6-3A6NJ46 265 aa20.58■□□□□ 0.88
C9orf40-201ENST00000376854 CEACAM8P31997 349 aaPredicted RBP20.58■□□□□ 0.88
C9orf40-201ENST00000376854 CD69Q07108 199 aa20.58■□□□□ 0.88
C9orf40-201ENST00000376854 DOLPP1Q86YN1 238 aa20.58■□□□□ 0.88
C9orf40-201ENST00000376854 OR8I2Q8N0Y5 310 aa20.58■□□□□ 0.88
C9orf40-201ENST00000376854 PNKDQ8N490 385 aa20.58■□□□□ 0.88
C9orf40-201ENST00000376854 OSR1Q8TAX0 266 aaPredicted RBP20.58■□□□□ 0.88
C9orf40-201ENST00000376854 HARBI1Q96MB7 349 aa20.58■□□□□ 0.88
C9orf40-201ENST00000376854 GAL3ST2Q9H3Q3 398 aa20.58■□□□□ 0.88
C9orf40-201ENST00000376854 POLR3KQ9Y2Y1 108 aaPredicted RBP20.58■□□□□ 0.88
C9orf40-201ENST00000376854 GGTLC3B5MD39 225 aa20.57■□□□□ 0.88
C9orf40-201ENST00000376854 FRMD6-AS1P0C7T7 363 aa20.57■□□□□ 0.88
C9orf40-201ENST00000376854 SSTP61278 116 aa20.57■□□□□ 0.88
C9orf40-201ENST00000376854 SNURFLB1AK76 121 aa20.56■□□□□ 0.88
C9orf40-201ENST00000376854 APOA2P02652 100 aa20.56■□□□□ 0.88
C9orf40-201ENST00000376854 LINC00310P59036 64 aa20.56■□□□□ 0.88
C9orf40-201ENST00000376854 TPPP2P59282 170 aa20.56■□□□□ 0.88
C9orf40-201ENST00000376854 NUP37Q8NFH4 326 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms