RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 FAM71F2Q6NXP2 309 aa18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 OR4X2Q8NGF9 303 aa18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 C2orf88Q9BSF0 95 aa18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 TOMM7Q9P0U1 55 aa18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 FAM131CQ96AQ9 280 aa18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 CACNG7P62955 275 aa18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 GLMPQ8WWB7 406 aa18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 LINC00312Q9Y6C7 94 aa18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 CASP8AP2Q9UKL3 1982 aa18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 SAA2-SAA4A0A096LPE2 208 aa18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 SAA1P0DJI8 122 aaPredicted RBP18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 SAA2P0DJI9 122 aaPredicted RBP18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 A0A1B0GUT8 65 aa18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 PQLC2LA1A4F0 135 aa18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 SRP19P09132 144 aaKnown RBP18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 ZNF883P0CG24 379 aa18.59■□□□□ 0.57
TM9SF3-201ENST00000371142 IMMP1LQ96LU5 166 aa18.58■□□□□ 0.57
TM9SF3-201ENST00000371142 DMRT1Q9Y5R6 373 aa18.58■□□□□ 0.57
TM9SF3-201ENST00000371142 MEF2CQ06413 473 aaPredicted RBP18.58■□□□□ 0.57
TM9SF3-201ENST00000371142 LINC00518Q8N0U6 118 aa18.58■□□□□ 0.57
TM9SF3-201ENST00000371142 CD24P25063 80 aa18.58■□□□□ 0.57
TM9SF3-201ENST00000371142 GNG5P63218 68 aa18.58■□□□□ 0.57
TM9SF3-201ENST00000371142 VWCEQ96DN2 955 aa18.58■□□□□ 0.57
TM9SF3-201ENST00000371142 NDUFA3O95167 84 aa18.58■□□□□ 0.56
TM9SF3-201ENST00000371142 LINC00114Q6XXX2 140 aa18.58■□□□□ 0.56
TM9SF3-201ENST00000371142 CEACAM1P13688 526 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 COLCA1Q6ZS62 124 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 LRTM2Q8N967 370 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 A0A1B0GTI1 187 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 NRN1LQ496H8 165 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 SEC16AO15027 2179 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 LHX2P50458 406 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 ZIC4Q8N9L1 334 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 FER1L6-AS1Q8NA97 138 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 RBBP6Q7Z6E9 1792 aaKnown RBP18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 A0A1B0GV90 55 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 RNASEH2CQ8TDP1 164 aaKnown RBP18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 SDF2L1Q9HCN8 221 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 YAE1D1Q9NRH1 226 aa18.57■□□□□ 0.56
TM9SF3-201ENST00000371142 C1QTNF9BB2RNN3 333 aa18.56■□□□□ 0.56
TM9SF3-201ENST00000371142 ZCCHC24Q8N2G6 241 aaKnown RBP18.56■□□□□ 0.56
TM9SF3-201ENST00000371142 FAM19A2Q8N3H0 131 aa18.56■□□□□ 0.56
TM9SF3-201ENST00000371142 ZNF525Q8N782 197 aa18.56■□□□□ 0.56
TM9SF3-201ENST00000371142 PARP14Q460N5 1801 aa18.56■□□□□ 0.56
TM9SF3-201ENST00000371142 LEMD1Q68G75 181 aa18.56■□□□□ 0.56
TM9SF3-201ENST00000371142 MRPL14Q6P1L8 145 aaKnown RBP18.56■□□□□ 0.56
TM9SF3-201ENST00000371142 TRGV2A0A075B6R0 118 aa18.55■□□□□ 0.56
TM9SF3-201ENST00000371142 ASXL3Q9C0F0 2248 aa18.55■□□□□ 0.56
TM9SF3-201ENST00000371142 IGKV3D-20A0A0C4DH25 116 aa18.55■□□□□ 0.56
TM9SF3-201ENST00000371142 SPTBP11277 2137 aa18.55■□□□□ 0.56
TM9SF3-201ENST00000371142 IGFBP3P17936 291 aaPredicted RBP18.55■□□□□ 0.56
TM9SF3-201ENST00000371142 HOXA5P20719 270 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 LYZL4Q96KX0 146 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 NBR2O15453 112 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 ATP5LO75964 103 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 WBP1Q96G27 269 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 MYOFQ9NZM1 2061 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 IGKV1D-13A0A0B4J2D9 117 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 LYNX1G3V0Z9 82 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 IGKV1-13P0DP09 117 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 LYNX1P0DP58 116 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 FAM90A1Q86YD7 464 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 A0A087WV48 116 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 LTBRP36941 435 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 CABIN1Q9Y6J0 2220 aa18.54■□□□□ 0.56
TM9SF3-201ENST00000371142 TRAV14DV4A0A0A6YYC5 116 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 C18orf12Q96KH6 178 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 SVILO95425 2214 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 TTC9CQ8N5M4 171 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 RNASE7Q9H1E1 156 aaKnown RBP18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 RAMP3O60896 148 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 ANKRD36A6QL64 1941 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 MTCL1Q9Y4B5 1905 aaKnown RBP18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 RNF222A6NCQ9 220 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 NUDT11Q96G61 164 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 HIGD1CA8MV81 97 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 UPK2O00526 184 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 CACNG8Q8WXS5 425 aa18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 PEF1Q9UBV8 284 aaKnown RBP18.53■□□□□ 0.56
TM9SF3-201ENST00000371142 CIARTQ8N365 385 aaPredicted RBP18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 CARHSP1Q9Y2V2 147 aaKnown RBP18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 IZUMO1RA6ND01 250 aa18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 H3BRM9 83 aa18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 SCN4AP35499 1836 aa18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 TDGF1P13385 188 aa18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 TRBV6-7A0A0A0MS04 114 aa18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 LEPP41159 167 aa18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 TMEM105Q8N8V8 129 aa18.52■□□□□ 0.56
TM9SF3-201ENST00000371142 MDC1Q14676 2089 aaKnown RBP18.52■□□□□ 0.55
TM9SF3-201ENST00000371142 CD55P08174 381 aa18.52■□□□□ 0.55
TM9SF3-201ENST00000371142 JKAMPQ9P055 326 aa18.52■□□□□ 0.55
TM9SF3-201ENST00000371142 PEMTQ9UBM1 199 aa18.52■□□□□ 0.55
TM9SF3-201ENST00000371142 IGLV3-19P01714 112 aa18.51■□□□□ 0.55
TM9SF3-201ENST00000371142 VDAC2P45880 294 aaPredicted RBP18.51■□□□□ 0.55
TM9SF3-201ENST00000371142 MRPS18CQ9Y3D5 142 aaKnown RBP18.51■□□□□ 0.55
TM9SF3-201ENST00000371142 APOMO95445 188 aa18.51■□□□□ 0.55
TM9SF3-201ENST00000371142 CD7P09564 240 aa18.51■□□□□ 0.55
TM9SF3-201ENST00000371142 PRB4P10163 310 aaPredicted RBP18.51■□□□□ 0.55
TM9SF3-201ENST00000371142 TCF23Q7RTU1 214 aa18.51■□□□□ 0.55
TM9SF3-201ENST00000371142 PAX1P15863 534 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms