RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 LOXP28300 417 aaPredicted RBP18.41■□□□□ 0.54
LDB1-201ENST00000361198 CDSNQ15517 529 aa18.41■□□□□ 0.54
LDB1-201ENST00000361198 TXNDC17Q9BRA2 123 aa18.41■□□□□ 0.54
LDB1-201ENST00000361198 MRPL20Q9BYC9 149 aaKnown RBP18.41■□□□□ 0.54
LDB1-201ENST00000361198 KAAG1Q9UBP8 84 aa18.41■□□□□ 0.54
LDB1-201ENST00000361198 CHD8Q9HCK8 2581 aa18.41■□□□□ 0.54
LDB1-201ENST00000361198 LCN2P80188 198 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 GAMTQ14353 236 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 ACTL10Q5JWF8 245 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 MGST2Q99735 147 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 OR51B2Q9Y5P1 312 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 F6UZH7 168 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 ATP5G3P48201 142 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 OR5R1Q8NH85 324 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 GGTLC1Q9BX51 225 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 HINT2Q9BX68 163 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 LRBAP50851 2863 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 COL6A6A6NMZ7 2263 aa18.4■□□□□ 0.54
LDB1-201ENST00000361198 AMBPP02760 352 aa18.39■□□□□ 0.54
LDB1-201ENST00000361198 STAG3L2P0CL84 134 aa18.39■□□□□ 0.54
LDB1-201ENST00000361198 STAG3L3P0CL85 134 aa18.39■□□□□ 0.54
LDB1-201ENST00000361198 SLC24A4Q8NFF2 622 aa18.39■□□□□ 0.54
LDB1-201ENST00000361198 LSM4Q9Y4Z0 139 aaKnown RBP18.39■□□□□ 0.54
LDB1-201ENST00000361198 NCOR2Q9Y618 2525 aa18.39■□□□□ 0.53
LDB1-201ENST00000361198 UPK2O00526 184 aa18.39■□□□□ 0.53
LDB1-201ENST00000361198 REG1BP48304 166 aa18.39■□□□□ 0.53
LDB1-201ENST00000361198 JOSD1Q15040 202 aaPredicted RBP18.39■□□□□ 0.53
LDB1-201ENST00000361198 KCNIP4Q6PIL6 250 aa18.39■□□□□ 0.53
LDB1-201ENST00000361198 PATZ1Q9HBE1 687 aaKnown RBP18.39■□□□□ 0.53
LDB1-201ENST00000361198 XKRY2A2RUG3 117 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 NDUFB4O95168 129 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 NPY1RP25929 384 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 CST9LP1Q5W188 147 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 MUC15Q8N387 334 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 IMMP2LQ96T52 175 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 ENY2Q9NPA8 101 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 PRNDQ9UKY0 176 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 PXMP4Q9Y6I8 212 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 LYNX1G3V0Z9 82 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 LYNX1P0DP58 116 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 UBE2G2P60604 165 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 ADORA2A-AS1P86434 159 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 DIAPH2-AS1Q14236 149 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 CLEC12BQ2HXU8 276 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 C1orf159Q96HA4 380 aa18.38■□□□□ 0.53
LDB1-201ENST00000361198 J3QR06 171 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 CA2P00918 260 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 SAA1P0DJI8 122 aaPredicted RBP18.37■□□□□ 0.53
LDB1-201ENST00000361198 DLX6P56179 175 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 H0YJW9 148 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 ARL14EPLP0DKL9 152 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 PKIAP61925 76 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 DEFA6Q01524 100 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 ARSJQ5FYB0 599 aaPredicted RBP18.37■□□□□ 0.53
LDB1-201ENST00000361198 MIC13Q5XKP0 118 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 TMEM144Q7Z5S9 345 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 OR5AN1Q8NGI8 311 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 OR10X1Q8NGY0 326 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 DERL1Q9BUN8 251 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 NPVFQ9HCQ7 196 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 ZNF257Q9Y2Q1 563 aa18.37■□□□□ 0.53
LDB1-201ENST00000361198 CXorf1O96002 111 aa18.36■□□□□ 0.53
LDB1-201ENST00000361198 CHRNA7P36544 502 aa18.36■□□□□ 0.53
LDB1-201ENST00000361198 TMEM155Q4W5P6 130 aa18.36■□□□□ 0.53
LDB1-201ENST00000361198 MALRD1Q5VYJ5 2156 aa18.36■□□□□ 0.53
LDB1-201ENST00000361198 APOA2P02652 100 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 COL8A2P25067 703 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 GPX4P36969 197 aaPredicted RBP18.35■□□□□ 0.53
LDB1-201ENST00000361198 PRCDQ00LT1 54 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 FOXL1Q12952 345 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 OSR1Q8TAX0 266 aaPredicted RBP18.35■□□□□ 0.53
LDB1-201ENST00000361198 BTF3L4Q96K17 158 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 BET1LQ9NYM9 111 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 FUT9Q9Y231 359 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 LINC00469Q8N7U9 141 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 HARBI1Q96MB7 349 aa18.35■□□□□ 0.53
LDB1-201ENST00000361198 DCHS2Q6V1P9 2916 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 TEX50A0A1B0GTY4 177 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 GZMBP10144 247 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 PAX1P15863 534 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 LINC00311Q8N616 119 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 ZNF596Q8TC21 504 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 TMEM37Q8WXS4 190 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 PLEKHA3Q9HB20 300 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 IL3RAP26951 378 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 ZNF672Q499Z4 452 aaPredicted RBP18.34■□□□□ 0.53
LDB1-201ENST00000361198 C11orf42Q8N5U0 333 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 OR5T1Q8NG75 326 aa18.34■□□□□ 0.53
LDB1-201ENST00000361198 TRBV20OR9-2A0A075B6H5 130 aa18.33■□□□□ 0.53
LDB1-201ENST00000361198 FAM78BQ5VT40 261 aa18.33■□□□□ 0.53
LDB1-201ENST00000361198 C8orf31Q8N9H6 132 aa18.33■□□□□ 0.53
LDB1-201ENST00000361198 ZNF114Q8NC26 417 aa18.33■□□□□ 0.53
LDB1-201ENST00000361198 ST6GALNAC6Q969X2 333 aa18.33■□□□□ 0.53
LDB1-201ENST00000361198 TMEM186Q96B77 213 aa18.33■□□□□ 0.53
LDB1-201ENST00000361198 CHODLQ9H9P2 273 aa18.33■□□□□ 0.53
LDB1-201ENST00000361198 IGHV1-8P0DP01 117 aa18.33■□□□□ 0.52
LDB1-201ENST00000361198 RPL15P61313 204 aaKnown RBP18.33■□□□□ 0.52
LDB1-201ENST00000361198 NABP2Q9BQ15 211 aa18.33■□□□□ 0.52
LDB1-201ENST00000361198 A0A087X0M5 115 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 A0A1B0GX30 115 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms