RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 LHFPL5Q8TAF8 219 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 PARLQ9H300 379 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 C2orf16Q68DN1 1984 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 LRRK1Q38SD2 2015 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 DOCK7Q96N67 2140 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 A6NDN8 102 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 HAX1O00165 279 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 CRYBB3P26998 211 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 FOXF2Q12947 444 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 CBLN2Q8IUK8 224 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 PLPPR1Q8TBJ4 325 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 ETV2O00321 342 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 B3GALT5-AS1P59052 145 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 TAS2R60P59551 318 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF506Q5JVG8 444 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 WDR25Q64LD2 544 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF324BQ6AW86 544 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 OR4B1Q8NGF8 309 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 PLXNB3Q9ULL4 1909 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 OTX1P32242 354 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 OR10S1Q8NGN2 331 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 GPHA2Q96T91 129 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 KIR2DL4Q99706 377 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 SLC50A1Q9BRV3 221 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 TMSB15BA0A087X1C1 80 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 A0A0G2JNJ9 132 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 PROB1E7EW31 1015 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 TMEM178BH3BS89 294 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 C1QL1O75973 258 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 DUTP33316 252 aaKnown RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 TFPI2P48307 235 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 PRCDQ00LT1 54 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 TMEM42Q69YG0 159 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 HEPN1Q6WQI6 88 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 Q9UFV3 132 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 MED12Q93074 2177 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 NDUFS8O00217 210 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF250P15622 560 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 LEMD1Q68G75 181 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 Q6ZS49 121 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 OR4C5Q8NGB2 326 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 OR10AG1Q8NH19 301 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 SRSF12Q8WXF0 261 aaKnown RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 WFIKKN1Q96NZ8 548 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 METRNQ9UJH8 293 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 PLAUP00749 431 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 SAA1P0DJI8 122 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 VDAC2P45880 294 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 RPL29P47914 159 aaKnown RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF672Q499Z4 452 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 AMMECR1LQ6DCA0 310 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 COLCA1Q6ZS62 124 aa4.06□□□□□ -1.76
SCN3A-202ENST00000360093 EAF1Q96JC9 268 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 FOXA2Q9Y261 457 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-202ENST00000360093 MSGN1A6NI15 193 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 MIEN1Q9BRT3 115 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 PNRC2Q9NPJ4 139 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 TBL2Q9Y4P3 447 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 GATA3P23771 443 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 HBBP68871 147 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 SRSF9Q13242 221 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 GOLT1AQ6ZVE7 132 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 PAQR4Q8N4S7 273 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 OR8A1Q8NGG7 326 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 WNT10AQ9GZT5 417 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 MRPL18Q9H0U6 180 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 RPRMQ9NS64 109 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 NUDT3O95989 172 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 IGKV3-15P01624 115 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 WNT2P09544 360 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 PKIAP61925 76 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 LY6DQ14210 128 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 C19orf54Q5BKX5 351 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 ARTNQ5T4W7 220 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 OR11H4Q8NGC9 324 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 RCC1LQ96I51 464 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 SRSF8Q9BRL6 282 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF319Q9P2F9 582 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 RPUSD1Q9UJJ7 312 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 ERVH48-1M5A8F1 160 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 KLK2P20151 261 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 CENPWQ5EE01 88 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 CIARTQ8N365 385 aaPredicted RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 A1L4Q6 167 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 CDKN1AP38936 164 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 FAM201AQ5SY85 155 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 B4DSR2 109 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 RRHO14718 337 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 IGFBP2P18065 325 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 NBL1P41271 181 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 CIRBPQ14011 172 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 TMEM155Q4W5P6 130 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 ZNF600Q6ZNG1 722 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 PEX7O00628 323 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 SMAD7O15105 426 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 LDLRAD4O15165 306 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 BTF3P20290 206 aaKnown RBP4.05□□□□□ -1.76
SCN3A-202ENST00000360093 PSMB2P49721 201 aa4.05□□□□□ -1.76
SCN3A-202ENST00000360093 ICAM4Q14773 271 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms