RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 TEX22C9J3V5 150 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 AMY1AP04745 511 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 METTL15P1P0C7V9 234 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 SNCAP37840 140 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 NDPQ00604 133 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 C9orf152Q5JTZ5 239 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 TMUB2Q71RG4 321 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 LURAP1LQ8IV03 231 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 KCNRGQ8N5I3 272 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 U3KQ87 197 aa17.33■□□□□ 0.36
HOXA4-201ENST00000360046 IGLC7A0M8Q6 106 aa17.32■□□□□ 0.36
HOXA4-201ENST00000360046 REG1AP05451 166 aa17.32■□□□□ 0.36
HOXA4-201ENST00000360046 AREGP15514 252 aa17.32■□□□□ 0.36
HOXA4-201ENST00000360046 NHLH2Q02577 135 aa17.32■□□□□ 0.36
HOXA4-201ENST00000360046 TMEM217Q8N7C4 229 aa17.32■□□□□ 0.36
HOXA4-201ENST00000360046 PARP11Q9NR21 331 aa17.32■□□□□ 0.36
HOXA4-201ENST00000360046 F8P00451 2351 aa17.31■□□□□ 0.36
HOXA4-201ENST00000360046 NPY1RP25929 384 aa17.31■□□□□ 0.36
HOXA4-201ENST00000360046 S100A11P31949 105 aa17.31■□□□□ 0.36
HOXA4-201ENST00000360046 HTR2BP41595 481 aa17.31■□□□□ 0.36
HOXA4-201ENST00000360046 SULT1A1P50225 295 aa17.31■□□□□ 0.36
HOXA4-201ENST00000360046 TMEM14EPQ6UXP3 125 aa17.31■□□□□ 0.36
HOXA4-201ENST00000360046 DUX5Q96PT3 197 aa17.31■□□□□ 0.36
HOXA4-201ENST00000360046 C15orf62A8K5M9 175 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 INS-IGF2F8WCM5 200 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 OR8U8P0C7N1 319 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 BAXQ07812 192 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 TUSC1Q2TAM9 212 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 OR8G2PQ6IF36 304 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 SMIM3Q9BZL3 60 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 KANTRA0A1W2PQU2 76 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 HSD17B13Q7Z5P4 300 aaPredicted RBP17.3■□□□□ 0.36
HOXA4-201ENST00000360046 BSCL2Q96G97 398 aaPredicted RBP17.3■□□□□ 0.36
HOXA4-201ENST00000360046 FBXO7Q9Y3I1 522 aa17.3■□□□□ 0.36
HOXA4-201ENST00000360046 C4BPBP20851 252 aa17.29■□□□□ 0.36
HOXA4-201ENST00000360046 RAB11AP62491 216 aa17.29■□□□□ 0.36
HOXA4-201ENST00000360046 SRSF8Q9BRL6 282 aaKnown RBP17.29■□□□□ 0.36
HOXA4-201ENST00000360046 FBXL17Q9UF56 701 aa17.29■□□□□ 0.36
HOXA4-201ENST00000360046 ATP6V0E1O15342 81 aa17.28■□□□□ 0.36
HOXA4-201ENST00000360046 IFNA4P05014 189 aa17.28■□□□□ 0.36
HOXA4-201ENST00000360046 BLCAPP62952 87 aa17.28■□□□□ 0.36
HOXA4-201ENST00000360046 TMEM170AQ8WVE7 144 aa17.28■□□□□ 0.36
HOXA4-201ENST00000360046 BCL2L11O43521 198 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 RNASE2P10153 161 aaKnown RBP17.27■□□□□ 0.36
HOXA4-201ENST00000360046 HBG1P69891 147 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 HBG2P69892 147 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 CLINT1Q14677 625 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 OPCMLQ14982 345 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 TMEM86BQ8N661 226 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 LFNGQ8NES3 379 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 OR5C1Q8NGR4 320 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 ZNF418Q8TF45 676 aaPredicted RBP17.27■□□□□ 0.36
HOXA4-201ENST00000360046 ARPC5LQ9BPX5 153 aa17.27■□□□□ 0.36
HOXA4-201ENST00000360046 DNAJC9-AS1A6NH13 148 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 LINC01548A6NM66 108 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 SUB1P53999 127 aaKnown RBP eCLIP17.27■□□□□ 0.35
HOXA4-201ENST00000360046 BSXQ3C1V8 233 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 ETV3LQ6ZN32 361 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 C19orf35Q6ZS72 473 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 ZNF767PQ75MW2 155 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 HAPLN4Q86UW8 402 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 SLC7A5P1Q8MH63 180 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 OR1S2Q8NGQ3 325 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 P2RX4Q99571 388 aa17.27■□□□□ 0.35
HOXA4-201ENST00000360046 EGR2P11161 476 aaPredicted RBP17.26■□□□□ 0.35
HOXA4-201ENST00000360046 ARL16Q0P5N6 197 aa17.26■□□□□ 0.35
HOXA4-201ENST00000360046 ECSCRQ19T08 205 aa17.26■□□□□ 0.35
HOXA4-201ENST00000360046 C2orf83Q53S99 150 aa17.26■□□□□ 0.35
HOXA4-201ENST00000360046 LILRB2Q8N423 598 aa17.26■□□□□ 0.35
HOXA4-201ENST00000360046 OR10P1Q8NGE3 313 aa17.26■□□□□ 0.35
HOXA4-201ENST00000360046 SGMS2Q8NHU3 365 aa17.26■□□□□ 0.35
HOXA4-201ENST00000360046 CRLF1O75462 422 aa17.25■□□□□ 0.35
HOXA4-201ENST00000360046 ATP5IP56385 69 aaPredicted RBP17.25■□□□□ 0.35
HOXA4-201ENST00000360046 SLC38A11Q08AI6 406 aa17.25■□□□□ 0.35
HOXA4-201ENST00000360046 ASPHD1Q5U4P2 390 aa17.25■□□□□ 0.35
HOXA4-201ENST00000360046 SLC35E3Q7Z769 313 aa17.25■□□□□ 0.35
HOXA4-201ENST00000360046 PMS2P5A8MQ11 134 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 DEFA4P12838 97 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 UNQ5815/PRO19632Q6UWF5 114 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 ZNF114Q8NC26 417 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 TEP1Q99973 2627 aaKnown RBP17.24■□□□□ 0.35
HOXA4-201ENST00000360046 TAAR5O14804 337 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 SCAF4O95104 1147 aaKnown RBP17.24■□□□□ 0.35
HOXA4-201ENST00000360046 IGHG2P01859 326 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 FAM157CP0CG43 387 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 Q6ZS46 218 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 PINX1Q96BK5 328 aaKnown RBP17.24■□□□□ 0.35
HOXA4-201ENST00000360046 ZNF471Q9BX82 626 aaPredicted RBP17.24■□□□□ 0.35
HOXA4-201ENST00000360046 NPFFR1Q9GZQ6 430 aa17.24■□□□□ 0.35
HOXA4-201ENST00000360046 F11RQ9Y624 299 aaKnown RBP17.24■□□□□ 0.35
HOXA4-201ENST00000360046 NF1P21359 2839 aa17.23■□□□□ 0.35
HOXA4-201ENST00000360046 CTRB1P17538 263 aa17.23■□□□□ 0.35
HOXA4-201ENST00000360046 CTRB2Q6GPI1 263 aa17.23■□□□□ 0.35
HOXA4-201ENST00000360046 STPG2Q8N412 459 aa17.23■□□□□ 0.35
HOXA4-201ENST00000360046 OR1P1Q8NH06 330 aa17.23■□□□□ 0.35
HOXA4-201ENST00000360046 WNT10AQ9GZT5 417 aa17.23■□□□□ 0.35
HOXA4-201ENST00000360046 WFDC1Q9HC57 220 aa17.23■□□□□ 0.35
HOXA4-201ENST00000360046 ESM1Q9NQ30 184 aa17.23■□□□□ 0.35
HOXA4-201ENST00000360046 NPIPB5A8MRT5 1133 aa17.22■□□□□ 0.35
HOXA4-201ENST00000360046 OR5T1Q8NG75 326 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms