RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 PPIAL4DF5H284 164 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 PPIAL4FP0DN26 164 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 CNN1P51911 297 aaKnown RBP16.39■□□□□ 0.21
SPG7-202ENST00000341316 LCN2P80188 198 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 DMRTC2Q8IXT2 367 aaPredicted RBP16.39■□□□□ 0.21
SPG7-202ENST00000341316 RAB1CQ92928 201 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 KCNIP2Q9NS61 270 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 PPIAL4AQ9Y536 164 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 A0A0U1RQK1 487 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 ZNF320A2RRD8 509 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 SHISA9B4DS77 424 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 UPK2O00526 184 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 TNFRSF13BO14836 293 aaPredicted RBP16.39■□□□□ 0.21
SPG7-202ENST00000341316 SSTP61278 116 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 TMEM30BQ3MIR4 351 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 NOL4LQ96MY1 436 aaPredicted RBP16.39■□□□□ 0.21
SPG7-202ENST00000341316 MRPL20Q9BYC9 149 aaKnown RBP16.39■□□□□ 0.21
SPG7-202ENST00000341316 NPVFQ9HCQ7 196 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 NBASA2RRP1 2371 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 E7EQL1 145 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 RPL15P61313 204 aaKnown RBP16.38■□□□□ 0.21
SPG7-202ENST00000341316 ZNF833PQ6ZTB9 187 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 MRPL41Q8IXM3 137 aaKnown RBP16.38■□□□□ 0.21
SPG7-202ENST00000341316 RNASE6Q93091 150 aaKnown RBP16.38■□□□□ 0.21
SPG7-202ENST00000341316 GAL3ST2Q9H3Q3 398 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 TMEM106BQ9NUM4 274 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 SNRPCP09234 159 aaKnown RBP16.38■□□□□ 0.21
SPG7-202ENST00000341316 CD99P14209 185 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 MEF2CQ06413 473 aaPredicted RBP16.38■□□□□ 0.21
SPG7-202ENST00000341316 TMEM144Q7Z5S9 345 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 FAM122AQ96E09 287 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 ZNF714Q96N38 554 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 CTSZQ9UBR2 303 aa16.38■□□□□ 0.21
SPG7-202ENST00000341316 J3QR06 171 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 SSX2Q16385 188 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 RTL8BQ17RB0 113 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 TMEM249Q2WGJ8 235 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 GBGT1Q8N5D6 347 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 H1FXQ92522 213 aaKnown RBP16.37■□□□□ 0.21
SPG7-202ENST00000341316 MISP3Q96FF7 219 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 TMEM204Q9BSN7 226 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 ENY2Q9NPA8 101 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 PRNDQ9UKY0 176 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 TRAPPC1Q9Y5R8 145 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 TNCP24821 2201 aa16.37■□□□□ 0.21
SPG7-202ENST00000341316 F6UZH7 168 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 ARL14EPLP0DKL9 152 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 REG1BP48304 166 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 TAS2R60P59551 318 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 TEX50A0A1B0GTY4 177 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 SAA1P0DJI8 122 aaPredicted RBP16.36■□□□□ 0.21
SPG7-202ENST00000341316 PRCDQ00LT1 54 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 DIAPH2-AS1Q14236 149 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 MOB3BQ86TA1 216 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 NDUFAF3Q9BU61 184 aa16.36■□□□□ 0.21
SPG7-202ENST00000341316 TRBV20OR9-2A0A075B6H5 130 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 A0A1B0GUS0 222 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 STAG3L2P0CL84 134 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 STAG3L3P0CL85 134 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 SFRP2Q96HF1 295 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 ATRXP46100 2492 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 SPATA31B1PQ5VZV4 182 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 TEPPQ6URK8 271 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 STPG3Q8N7X2 389 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 C2orf88Q9BSF0 95 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 PLEKHA3Q9HB20 300 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 SEPSECSQ9HD40 501 aaKnown RBP16.35■□□□□ 0.21
SPG7-202ENST00000341316 ZNF257Q9Y2Q1 563 aa16.35■□□□□ 0.21
SPG7-202ENST00000341316 SOX15O60248 233 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 IGFBP2P18065 325 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 SGMS2Q8NHU3 365 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 MDFIC2A0A1B0GVS7 189 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 SCO2A0A1W2PP80 73 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 H0YJW9 148 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 HNF1AP20823 631 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 FOXL1Q12952 345 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 OR10W1Q8NGF6 305 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 IMMP2LQ96T52 175 aa16.34■□□□□ 0.21
SPG7-202ENST00000341316 COL25A1Q9BXS0 654 aaPredicted RBP16.34■□□□□ 0.21
SPG7-202ENST00000341316 NDUFB3O43676 98 aa16.33■□□□□ 0.2
SPG7-202ENST00000341316 LOXP28300 417 aaPredicted RBP16.33■□□□□ 0.2
SPG7-202ENST00000341316 EFNB3Q15768 340 aa16.33■□□□□ 0.2
SPG7-202ENST00000341316 USF2Q15853 346 aaPredicted RBP16.33■□□□□ 0.2
SPG7-202ENST00000341316 TMEM256Q8N2U0 113 aa16.33■□□□□ 0.2
SPG7-202ENST00000341316 DYNLRB1Q9NP97 96 aa16.33■□□□□ 0.2
SPG7-202ENST00000341316 BET1LQ9NYM9 111 aa16.33■□□□□ 0.2
SPG7-202ENST00000341316 ARFGEF3Q5TH69 2177 aa16.33■□□□□ 0.2
SPG7-202ENST00000341316 IQCJQ1A5X6 159 aa16.33■□□□□ 0.2
SPG7-202ENST00000341316 SSX8Q7RTT4 187 aa16.33■□□□□ 0.2
SPG7-202ENST00000341316 PLAUP00749 431 aa16.32■□□□□ 0.2
SPG7-202ENST00000341316 CHRNB4P30926 498 aa16.32■□□□□ 0.2
SPG7-202ENST00000341316 MLANAQ16655 118 aa16.32■□□□□ 0.2
SPG7-202ENST00000341316 LBHQ53QV2 105 aaPredicted RBP16.32■□□□□ 0.2
SPG7-202ENST00000341316 OR5AN1Q8NGI8 311 aa16.32■□□□□ 0.2
SPG7-202ENST00000341316 BTF3L4Q96K17 158 aa16.32■□□□□ 0.2
SPG7-202ENST00000341316 HARBI1Q96MB7 349 aa16.32■□□□□ 0.2
SPG7-202ENST00000341316 SPTBN4Q9H254 2564 aa16.32■□□□□ 0.2
SPG7-202ENST00000341316 E7EUB6 86 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 NUPR1O60356 82 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 FOXH1O75593 365 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms