RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 HIST1H2BDP58876 126 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 HIST1H2BCP62807 126 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 HIST2H2BEQ16778 126 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.64□□□□□ -0.23
RTL6-201ENST00000341255 FAM90A1Q86YD7 464 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 HIST1H2BHQ93079 126 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 HIST1H2BNQ99877 126 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 HIST1H2BMQ99879 126 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 LOC102723996A0A087X1L8 192 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 GAS1P54826 345 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 LRTM2Q8N967 370 aa13.64□□□□□ -0.23
RTL6-201ENST00000341255 BEX4Q9NWD9 120 aaPredicted RBP13.64□□□□□ -0.23
RTL6-201ENST00000341255 GREB1LQ9C091 1923 aaPredicted RBP13.64□□□□□ -0.23
RTL6-201ENST00000341255 MDC1Q14676 2089 aaKnown RBP13.64□□□□□ -0.23
RTL6-201ENST00000341255 IGKV1-9A0A0C4DH69 117 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 MUC21A0A0G2JKD1 596 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 MUC21A0A140T8X8 626 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 C1QTNF9BB2RNN3 333 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 MUC21Q5SSG8 566 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 FAM201AQ5SY85 155 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 TRAV9-1A0A075B6T8 112 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 IGHV3OR16-13A0A075B7E8 117 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 IGHV3-74A0A0B4J1X5 117 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 UBE2CO00762 179 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 C1QTNF9P0C862 333 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 SNRPD3P62318 126 aaKnown RBP13.63□□□□□ -0.23
RTL6-201ENST00000341255 MEF2CQ06413 473 aaPredicted RBP13.63□□□□□ -0.23
RTL6-201ENST00000341255 PAQR4Q8N4S7 273 aaPredicted RBP13.63□□□□□ -0.23
RTL6-201ENST00000341255 NDUFAF3Q9BU61 184 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 FBLN5Q9UBX5 448 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 SBF2Q86WG5 1849 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 IQCF6A8MYZ5 107 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 CCL20P78556 96 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 ZNF324BQ6AW86 544 aaPredicted RBP13.63□□□□□ -0.23
RTL6-201ENST00000341255 RPP21Q9H633 154 aaKnown RBP13.63□□□□□ -0.23
RTL6-201ENST00000341255 INTS1Q8N201 2190 aaKnown RBP13.63□□□□□ -0.23
RTL6-201ENST00000341255 ADMP35318 185 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 BSPH1Q075Z2 132 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 NIT1Q86X76 327 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 NEU4Q8WWR8 484 aaPredicted RBP13.63□□□□□ -0.23
RTL6-201ENST00000341255 ABHD17AQ96GS6 310 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 FBXL15Q9H469 300 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 WFDC1Q9HC57 220 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 ZNF236Q9UL36 1845 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 ARID2Q68CP9 1835 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 KIR2DL4Q99706 377 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 NRN1Q9NPD7 142 aa13.63□□□□□ -0.23
RTL6-201ENST00000341255 A0A1B0GUT8 65 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 IZUMO1RA6ND01 250 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 EMP1P54849 157 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 CENPVQ7Z7K6 275 aaPredicted RBP13.62□□□□□ -0.23
RTL6-201ENST00000341255 PRDM13Q9H4Q3 707 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 IGHV3OR16-10A0A075B7F0 116 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 TRBV6-7A0A0A0MS04 114 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 TRAV24A0A0B4J272 114 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 OR52E5Q8NH55 327 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 PLPPR1Q8TBJ4 325 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 LYZL4Q96KX0 146 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 S4R3C0 116 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 ZNF56Q15929 161 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 RNASE7Q9H1E1 156 aaKnown RBP13.62□□□□□ -0.23
RTL6-201ENST00000341255 WDR82Q6UXN9 313 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 TEX45Q8NA69 505 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
RTL6-201ENST00000341255 FLVCR1-AS1Q8TAF5 88 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 DUX5Q96PT3 197 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 PLXNA1Q9UIW2 1896 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 BRCA1P38398 1863 aaKnown RBP13.61□□□□□ -0.23
RTL6-201ENST00000341255 A0A0A6YYD4 124 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 TRGV3P03979 118 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 LHX2P50458 406 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 GLRX5Q86SX6 157 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 CRIPAKQ8N1N5 446 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 LAMTOR2Q9Y2Q5 125 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 CD55P08174 381 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 MPZP25189 248 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 CIRBPQ14011 172 aaKnown RBP13.61□□□□□ -0.23
RTL6-201ENST00000341255 TTC9CQ8N5M4 171 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 WBP1Q96G27 269 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 LINC00312Q9Y6C7 94 aa13.61□□□□□ -0.23
RTL6-201ENST00000341255 HAX1O00165 279 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 FAM159AQ6UWV7 190 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 RTN4RL2Q86UN3 420 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 C9orf106Q8NAJ2 232 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 FMC1Q96HJ9 113 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 MRPL16Q9NX20 251 aaKnown RBP13.6□□□□□ -0.23
RTL6-201ENST00000341255 IGLV3-32A0A0A0MS00 114 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 GCSAMLQ5JQS6 135 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 IGKV1D-8A0A087WSZ0 117 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 HIGD1CA8MV81 97 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 HEPN1Q6WQI6 88 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 C17orf100A8MU93 164 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 FAM89BQ8N5H3 189 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 FOXA2Q9Y261 457 aaPredicted RBP13.6□□□□□ -0.23
RTL6-201ENST00000341255 CACNA1DQ01668 2161 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 EFEMP2O95967 443 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 ZNF319Q9P2F9 582 aa13.6□□□□□ -0.23
RTL6-201ENST00000341255 CELA3BP08861 270 aa13.59□□□□□ -0.23
RTL6-201ENST00000341255 TMEM170BQ5T4T1 132 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms