RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 RELBQ01201 579 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 KIAA1644Q3SXP7 199 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 OR2D3Q8NGH3 330 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 YPEL1O60688 119 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 ZNF883P0CG24 379 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 COL8A2P25067 703 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 KIR2DL2P43627 348 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 AMTP48728 403 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 MORN2Q502X0 79 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 TCTEX1D1Q8N7M0 179 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 OR10G8Q8NGN5 311 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 YPEL2Q96QA6 119 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 LRFN3Q9BTN0 628 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 HES4Q9HCC6 221 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 ARFGEF3Q5TH69 2177 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 HCFC1P51610 2035 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 SLC17A3O00476 420 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 FAM19A2Q8N3H0 131 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 SARAFQ96BY9 339 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 OR2V2Q96R30 315 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 ZNF586Q9NXT0 402 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 SLC45A2Q9UMX9 530 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 PROCRQ9UNN8 238 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 TCF19Q9Y242 345 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 PRRX1P54821 245 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 PYGO2Q9BRQ0 406 aa13.65□□□□□ -0.22
CDC42EP4-201ENST00000335793 GAGE12BA1L429 117 aa13.65□□□□□ -0.23
CDC42EP4-201ENST00000335793 CDX4O14627 284 aaPredicted RBP13.65□□□□□ -0.23
CDC42EP4-201ENST00000335793 P0C879 139 aa13.65□□□□□ -0.23
CDC42EP4-201ENST00000335793 MRPL52Q86TS9 123 aaKnown RBP13.65□□□□□ -0.23
CDC42EP4-201ENST00000335793 WDR31Q8NA23 367 aa13.65□□□□□ -0.23
CDC42EP4-201ENST00000335793 NPVFQ9HCQ7 196 aa13.65□□□□□ -0.23
CDC42EP4-201ENST00000335793 KCNIP2Q9NS61 270 aa13.65□□□□□ -0.23
CDC42EP4-201ENST00000335793 SLC35D1Q9NTN3 355 aa13.65□□□□□ -0.23
CDC42EP4-201ENST00000335793 CXorf1O96002 111 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 SP9P0CG40 484 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 MYOD1P15172 320 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 TSPOP30536 169 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 NIT1Q86X76 327 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 OR4B1Q8NGF8 309 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 UHRF2Q96PU4 802 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 PLEKHA3Q9HB20 300 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 RBFOX2O43251 390 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 TOMM40O96008 361 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 RPL31P62899 125 aaKnown RBP13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 MZT1Q08AG7 82 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 SPATA31B1PQ5VZV4 182 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 OCC1Q8TAD7 63 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 MGST2Q99735 147 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 WASHC3Q9Y3C0 194 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 SPTBN4Q9H254 2564 aa13.64□□□□□ -0.23
CDC42EP4-201ENST00000335793 MGST3O14880 152 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 PROP1O75360 226 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 FRMD6-AS1P0C7T7 363 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 NPY1RP25929 384 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 SERTAD4Q9NUC0 356 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 NDUFS8O00217 210 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 OR7C2O60412 319 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 MT-CO2P00403 227 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 IGKV3-15P01624 115 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 ZNF134P52741 427 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 HTD2P86397 168 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 TEPPQ6URK8 271 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 GGTLC1Q9BX51 225 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 CLCF1Q9UBD9 225 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 TP53TG3Q9ULZ0 132 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 TBL2Q9Y4P3 447 aaKnown RBP13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 SLC35B1P78383 322 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 TRAT1Q6PIZ9 186 aa13.63□□□□□ -0.23
CDC42EP4-201ENST00000335793 IGKV1D-17A0A075B6S4 117 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 MPDU1O75352 247 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 COMPP49747 757 aaPredicted RBP13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 RHOBP62745 196 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 OR4S2Q8NH73 311 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 FAM216AQ8WUB2 273 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 SMIM12Q96EX1 92 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 CALYQ9NYX4 217 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 OTOGLQ3ZCN5 2332 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 TRAV30A0A087WSZ9 112 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 IGHV1-18A0A0C4DH31 117 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 GFRA3O60609 400 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 FOXH1O75593 365 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 DEFB109BQ30KR1 87 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 C1orf174Q8IYL3 243 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 STPG3Q8N7X2 389 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 OR1N2Q8NGR9 330 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 PRR7Q8TB68 274 aa13.62□□□□□ -0.23
CDC42EP4-201ENST00000335793 C15orf65H3BRN8 121 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 GATA2P23769 480 aaPredicted RBP13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 OPRK1P41145 380 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 LCN2P80188 198 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 PSG5Q15238 335 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 MPV17L2Q567V2 206 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 BHLHA15Q7RTS1 189 aaPredicted RBP13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 NAA38Q9BRA0 125 aaKnown RBP13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 JPT1Q9UK76 154 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 FCN1O00602 326 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 IER3P46695 156 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms