RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 A0A1B0GTI1 187 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 C17orf98A8MV24 154 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 PROB1E7EW31 1015 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 RSPO4Q2I0M5 234 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-201ENST00000334504 ZNF48Q96MX3 618 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV5-10-1A0A0J9YXX1 117 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 NKX2-8O15522 239 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 HTN3P15516 51 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 RNF182Q8N6D2 247 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.29□□□□□ -1.08
COL4A6-201ENST00000334504 A0A087X0K7 114 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 SRSF1Q07955 248 aaKnown RBP eCLIP8.29□□□□□ -1.08
COL4A6-201ENST00000334504 PYY3Q5JQD4 70 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 WFDC1Q9HC57 220 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 SNRPD3P62318 126 aaKnown RBP8.29□□□□□ -1.08
COL4A6-201ENST00000334504 DNM1P46Q6ZS02 220 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 GTSCR1Q86UQ5 136 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 OCC1Q8TAD7 63 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 DCTN5Q9BTE1 182 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 FOXA2Q9Y261 457 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-201ENST00000334504 IGKV1D-42A0A075B6H8 117 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 IGKV1-8A0A0C4DH67 115 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 SPINT1O43278 529 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 SLC25A20O43772 301 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 ATP5IP56385 69 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-201ENST00000334504 DMRTC2Q8IXT2 367 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-201ENST00000334504 SEMA5BQ9P283 1151 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 hDV102S1A0JD36 115 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 M0R2P5 195 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 CELA2AP08217 269 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 PTGDSP41222 190 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 LY6G6FQ5SQ64 297 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 NR2C2APQ86WQ0 139 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 BCL6BQ8N143 479 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-201ENST00000334504 OSTCQ9NRP0 149 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 A0A1W2PRE2 83 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 IGHMP01871 453 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 UCP1P25874 307 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 EGR4Q05215 589 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 CD69Q07108 199 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 PHLDA1Q8WV24 401 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-201ENST00000334504 GGTLC3B5MD39 225 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 TDGF1P13385 188 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 STPG1Q5TH74 334 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 OR9G4Q8NGQ1 327 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 ATG2BQ96BY7 2078 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 TNRC6CQ9HCJ0 1690 aaKnown RBP8.28□□□□□ -1.08
COL4A6-201ENST00000334504 CFAP161Q6P656 301 aa8.28□□□□□ -1.08
COL4A6-201ENST00000334504 MAP1BP46821 2468 aaKnown RBP8.27□□□□□ -1.08
COL4A6-201ENST00000334504 EREGO14944 169 aa8.27□□□□□ -1.08
COL4A6-201ENST00000334504 NPC2P61916 151 aa8.27□□□□□ -1.08
COL4A6-201ENST00000334504 OR9G1Q8NH87 305 aa8.27□□□□□ -1.08
COL4A6-201ENST00000334504 TM2D1Q9BX74 207 aa8.27□□□□□ -1.08
COL4A6-201ENST00000334504 GAGE12BA1L429 117 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 MPV17L2Q567V2 206 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 OR5P3Q8WZ94 311 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 REG4Q9BYZ8 158 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 OTORQ9NRC9 128 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 PCM1Q15154 2024 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 PPIAL4CA0A0B4J2A2 164 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 PPIAL4GP0DN37 164 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 LILRA6Q6PI73 481 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 ADAMTSL5Q6ZMM2 481 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 AKAP11Q9UKA4 1901 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 SCN7AQ01118 1682 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 ZNF831Q5JPB2 1677 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 CD5P06127 495 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 CD300EQ496F6 205 aaPredicted RBP8.27□□□□□ -1.09
COL4A6-201ENST00000334504 PRR31Q5SQ13 230 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 MGST2Q99735 147 aa8.27□□□□□ -1.09
COL4A6-201ENST00000334504 LSM4Q9Y4Z0 139 aaKnown RBP8.27□□□□□ -1.09
COL4A6-201ENST00000334504 ARID1AO14497 2285 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 NAPSAO96009 420 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 GUSBP1Q15486 140 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 ZNF664Q8N3J9 261 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 KLF14Q8TD94 323 aaPredicted RBP8.26□□□□□ -1.09
COL4A6-201ENST00000334504 DEPPQ9NTK1 212 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 COL22A1Q8NFW1 1626 aaPredicted RBP8.26□□□□□ -1.09
COL4A6-201ENST00000334504 PLNP26678 52 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 IFI27P40305 119 aaPredicted RBP8.26□□□□□ -1.09
COL4A6-201ENST00000334504 LHFPL4Q7Z7J7 247 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 VSIRQ9H7M9 311 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 TRPM3Q9HCF6 1732 aaPredicted RBP8.26□□□□□ -1.09
COL4A6-201ENST00000334504 H0YIZ8 118 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 SRXN1Q9BYN0 137 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 A0A0G2JMM0 328 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 A0A1W2PPB8 328 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 KIR3DP1A8MWS1 328 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 KIR3DS1Q14943 382 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 TEX38Q6PEX7 206 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 DUX3Q96PT4 197 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 RGPD4Q7Z3J3 1758 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 TRBV24-1A0A075B6N3 115 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 UMODP07911 640 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 ACTL10Q5JWF8 245 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 PLPPR1Q8TBJ4 325 aa8.26□□□□□ -1.09
COL4A6-201ENST00000334504 SCARF2Q96GP6 870 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms