RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CA1P00915 261 aaPredicted RBP20.08■□□□□ 0.8
SOX1-201ENST00000330949 GATA2P23769 480 aaPredicted RBP20.08■□□□□ 0.8
SOX1-201ENST00000330949 PAX2Q02962 417 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 C1orf159Q96HA4 380 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 TRIB1Q96RU8 372 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 KNTC1P50748 2209 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 TMEM30CPA0ZSE6 113 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 GFRA3O60609 400 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 APOBEC3AP31941 199 aaPredicted RBP20.08■□□□□ 0.8
SOX1-201ENST00000330949 VDAC2P45880 294 aaPredicted RBP20.08■□□□□ 0.8
SOX1-201ENST00000330949 C1orf185Q5T7R7 199 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 OR52E5Q8NH55 327 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 OR7C2O60412 319 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 SSR4P51571 173 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 PRAMEF5Q5TYX0 476 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 PRAMEF6Q5VXH4 476 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 MIR17HGQ75NE6 70 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 IGF2BP2-AS1Q96M15 143 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 DNAJC13O75165 2243 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 IGHV1-45A0A0A0MS14 117 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 G3V4G9 280 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 NDUFS8O00217 210 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 RPS19BP1Q86WX3 136 aaKnown RBP20.07■□□□□ 0.8
SOX1-201ENST00000330949 OR4S2Q8NH73 311 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 SAP25Q8TEE9 199 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 SCRT2Q9NQ03 307 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 POLDIP2Q9Y2S7 368 aa20.07■□□□□ 0.8
SOX1-201ENST00000330949 RFPL3SP0C7P2 107 aa20.06■□□□□ 0.8
SOX1-201ENST00000330949 ZNF146Q15072 292 aa20.06■□□□□ 0.8
SOX1-201ENST00000330949 GTF2H5Q6ZYL4 71 aa20.06■□□□□ 0.8
SOX1-201ENST00000330949 TNFRSF14Q92956 283 aa20.06■□□□□ 0.8
SOX1-201ENST00000330949 GCM1Q9NP62 436 aa20.06■□□□□ 0.8
SOX1-201ENST00000330949 MED12LQ86YW9 2145 aa20.06■□□□□ 0.8
SOX1-201ENST00000330949 LOC400499M0QZD8 3231 aa20.06■□□□□ 0.8
SOX1-201ENST00000330949 CDX2Q99626 313 aaPredicted RBP20.06■□□□□ 0.8
SOX1-201ENST00000330949 PLEKHA3Q9HB20 300 aa20.06■□□□□ 0.8
SOX1-201ENST00000330949 OOEPA6NGQ2 149 aa20.05■□□□□ 0.8
SOX1-201ENST00000330949 MRPL33O75394 65 aaKnown RBP20.05■□□□□ 0.8
SOX1-201ENST00000330949 HBZP02008 142 aa20.05■□□□□ 0.8
SOX1-201ENST00000330949 COX6A1P12074 109 aa20.05■□□□□ 0.8
SOX1-201ENST00000330949 DUSP23Q9BVJ7 150 aa20.05■□□□□ 0.8
SOX1-201ENST00000330949 C7orf71A4D174 169 aa20.05■□□□□ 0.8
SOX1-201ENST00000330949 ERVK11-1P61568 191 aa20.05■□□□□ 0.8
SOX1-201ENST00000330949 FAM120AOSQ5T036 256 aa20.05■□□□□ 0.8
SOX1-201ENST00000330949 ABHD12Q8N2K0 398 aa20.05■□□□□ 0.8
SOX1-201ENST00000330949 SSBP3Q9BWW4 388 aaPredicted RBP20.05■□□□□ 0.8
SOX1-201ENST00000330949 C21orf140B9A014 251 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 ACTL6BO94805 426 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 RNFT1Q5M7Z0 435 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 GDF5OSQ5U4N7 250 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 FAM53AQ6NSI3 398 aaPredicted RBP20.04■□□□□ 0.8
SOX1-201ENST00000330949 RTL8AQ9BWD3 113 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 CACNA1DQ01668 2161 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 PRR20EP86478 221 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 PRR20CP86479 221 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 PRR20DP86480 221 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 PRR20BP86481 221 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 PRR20AP86496 221 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 RTL8BQ17RB0 113 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 WIPI1Q5MNZ9 446 aaPredicted RBP20.04■□□□□ 0.8
SOX1-201ENST00000330949 FAM168AQ92567 244 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 MS4A6AQ9H2W1 248 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 GPR179Q6PRD1 2367 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 HCFC1P51610 2035 aa20.04■□□□□ 0.8
SOX1-201ENST00000330949 GGTLC3B5MD39 225 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 KLF7O75840 302 aaPredicted RBP20.03■□□□□ 0.8
SOX1-201ENST00000330949 LINC00205P59089 165 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 NUP35Q8NFH5 326 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 P04436 131 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 CYC1P08574 325 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 SRYQ05066 204 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 OR1B1Q8NGR6 318 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 LEPROTL1O95214 131 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 GPR6P46095 362 aaPredicted RBP20.03■□□□□ 0.8
SOX1-201ENST00000330949 MBD6Q96DN6 1003 aa20.03■□□□□ 0.8
SOX1-201ENST00000330949 GPR183P32249 361 aa20.02■□□□□ 0.8
SOX1-201ENST00000330949 SEC11AP67812 179 aa20.02■□□□□ 0.8
SOX1-201ENST00000330949 FAM231DQ6ZW35 169 aa20.02■□□□□ 0.8
SOX1-201ENST00000330949 FAM214BQ7L5A3 538 aa20.02■□□□□ 0.8
SOX1-201ENST00000330949 ZNF355PQ9NSJ1 428 aa20.02■□□□□ 0.8
SOX1-201ENST00000330949 SIT1Q9Y3P8 196 aa20.02■□□□□ 0.8
SOX1-201ENST00000330949 A0A087X0K7 114 aa20.02■□□□□ 0.79
SOX1-201ENST00000330949 OR1C1Q15619 314 aa20.02■□□□□ 0.79
SOX1-201ENST00000330949 UFSP1Q6NVU6 142 aa20.02■□□□□ 0.79
SOX1-201ENST00000330949 CHCHD1Q96BP2 118 aaKnown RBP20.02■□□□□ 0.79
SOX1-201ENST00000330949 GRAMD2BQ96HH9 432 aa20.02■□□□□ 0.79
SOX1-201ENST00000330949 LINC00470Q9BZP3 86 aa20.02■□□□□ 0.79
SOX1-201ENST00000330949 A0A1W2PRE2 83 aa20.01■□□□□ 0.79
SOX1-201ENST00000330949 COL8A2P25067 703 aa20.01■□□□□ 0.79
SOX1-201ENST00000330949 PLP2Q04941 152 aa20.01■□□□□ 0.79
SOX1-201ENST00000330949 MAFAQ8NHW3 353 aaPredicted RBP20.01■□□□□ 0.79
SOX1-201ENST00000330949 URB1-AS1Q96HZ7 61 aa20.01■□□□□ 0.79
SOX1-201ENST00000330949 IMMP1LQ96LU5 166 aa20.01■□□□□ 0.79
SOX1-201ENST00000330949 ATP5L2Q7Z4Y8 100 aa20.01■□□□□ 0.79
SOX1-201ENST00000330949 CHRDL1Q9BU40 450 aa20.01■□□□□ 0.79
SOX1-201ENST00000330949 SSBP4Q9BWG4 385 aaPredicted RBP20.01■□□□□ 0.79
SOX1-201ENST00000330949 DUSP13Q9UII6 198 aa20.01■□□□□ 0.79
SOX1-201ENST00000330949 NCKAP5O14513 1909 aa20■□□□□ 0.79
SOX1-201ENST00000330949 LPAL2Q16609 132 aa20■□□□□ 0.79
SOX1-201ENST00000330949 R4GN57 208 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms