RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 UCP3P55916 312 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 ATP5IP56385 69 aaPredicted RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 BRWD1-AS2P59051 145 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 TAS2R60P59551 318 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 RPL30P62888 115 aaKnown RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 USF2Q15853 346 aaPredicted RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 TATDN3Q17R31 274 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 VAX1Q5SQQ9 334 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 TMEM69Q5SWH9 247 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 LPCAT3Q6P1A2 487 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 HSD17B13Q7Z5P4 300 aaPredicted RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 NECAP1Q8NC96 275 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 OR4D10Q8NGI6 311 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 GPX8Q8TED1 209 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 TCTEX1D2Q8WW35 142 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 GLMPQ8WWB7 406 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 MOB3AQ96BX8 217 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 RBMXL1Q96E39 390 aaKnown RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 OR4C12Q96R67 309 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 PHB2Q99623 299 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 FAM103A1Q9BTL3 118 aaKnown RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 FUNDC2Q9BWH2 189 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 PARD6GQ9BYG4 376 aaPredicted RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 SLC5A7Q9GZV3 580 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 SLC2A9Q9NRM0 540 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 C11orf21Q9P2W6 132 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 RNF24Q9Y225 148 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 A3GALT2U3KPV4 340 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.84□□□□□ -1.63
SMG1-201ENST00000330588 TRAV34A0A0B4J273 112 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 MARCH11A6NNE9 402 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 TEX22C9J3V5 150 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 LGALS9O00182 355 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 SAP30O75446 220 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 CLEC3BP05452 202 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 NQO2P16083 231 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 TBPP20226 339 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 S100GP29377 79 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 RCVRNP35243 200 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 RPL27AP46776 148 aaKnown RBP4.84□□□□□ -1.63
SMG1-201ENST00000330588 ALDH3B2P48448 385 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 RORCP51449 518 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 TAS2R20P59543 309 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 HERV-K104P61576 105 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 RPL8P62917 257 aaKnown RBP4.84□□□□□ -1.63
SMG1-201ENST00000330588 IL18Q14116 193 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 LAX1Q8IWV1 398 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 GVQW1Q8N7I0 195 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 SAMD12Q8N8I0 201 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 IL17DQ8TAD2 202 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 SECTM1Q8WVN6 248 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 AP3S1Q92572 193 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 DCUN1D5Q9BTE7 237 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 ZC4H2Q9NQZ6 224 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 ZNF355PQ9NSJ1 428 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 COA4Q9NYJ1 87 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 SMAD5-AS1Q9Y6J3 95 aa4.84□□□□□ -1.63
SMG1-201ENST00000330588 VWFP04275 2813 aa4.84□□□□□ -1.64
SMG1-201ENST00000330588 H0Y980 276 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 MPPED1O15442 326 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 CYB5BO43169 146 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 G0S2P27469 103 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 PSMB6P28072 239 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 CEBPGP53567 150 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 RHOGP84095 191 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 SSBP1Q04837 148 aaKnown RBP4.83□□□□□ -1.64
SMG1-201ENST00000330588 ATP5G2Q06055 141 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 SLAQ13239 276 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 SMCO1Q147U7 214 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 DEFB121Q5J5C9 76 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 PXDC1Q5TGL8 231 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 ZNF818PQ6ZRF7 136 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 CMTM1Q8IZ96 169 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 SPAG16Q8N0X2 631 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 Q8N402 240 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 OR9G4Q8NGQ1 327 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 OR5H2Q8NGV7 314 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 MS4A10Q96PG2 267 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 FYTTD1Q96QD9 318 aaKnown RBP4.83□□□□□ -1.64
SMG1-201ENST00000330588 OR5B12Q96R08 314 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 C12orf57Q99622 126 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 MRPS26Q9BYN8 205 aaKnown RBP4.83□□□□□ -1.64
SMG1-201ENST00000330588 SAV1Q9H4B6 383 aaPredicted RBP4.83□□□□□ -1.64
SMG1-201ENST00000330588 CCL28Q9NRJ3 127 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 EHFQ9NZC4 300 aa4.83□□□□□ -1.64
SMG1-201ENST00000330588 TRBV7-1A0A0A6YYK4 115 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 GPR31O00270 319 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 UPK2O00526 184 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 IGHV3-11P01762 117 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 EIF4EP06730 217 aaKnown RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 SMIM18P0DKX4 95 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 GP9P14770 177 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 ZNF182P17025 639 aaPredicted RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 HLA-GP17693 338 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 F2RP25116 425 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 S100PP25815 95 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 GNRHRP30968 328 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 ARL3P36405 182 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms