RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MPDU1O75352 247 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 REG1BP48304 166 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 SUMO1P63165 101 aaKnown RBP16.27■□□□□ 0.19
CRLF3-201ENST00000324238 ZNF124Q15973 351 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 YPEL2Q96QA6 119 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 TMEM106BQ9NUM4 274 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 IDI2-AS1Q9NZ38 188 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 IL36BQ9NZH7 164 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 SVEP1Q4LDE5 3571 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 TANC2Q9HCD6 1990 aa16.27■□□□□ 0.19
CRLF3-201ENST00000324238 TRAV17A0A0B4J275 112 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 C15orf61A6NNL5 157 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 K7EM74 188 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 C1orf194Q5T5A4 169 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 MORN5Q5VZ52 161 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 SEM1Q6ZVN7 128 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 OR4S2Q8NH73 311 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 ZNF71Q9NQZ8 489 aaPredicted RBP16.26■□□□□ 0.19
CRLF3-201ENST00000324238 OR51B2Q9Y5P1 312 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 KRTDAPP60985 99 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 BEND2Q8NDZ0 799 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 SSBP3Q9BWW4 388 aaPredicted RBP16.26■□□□□ 0.19
CRLF3-201ENST00000324238 PPIAL4AQ9Y536 164 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 PRR33A8MZF0 331 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 IGHG3P01860 377 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 LINC00869P0C866 280 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 OR10J1P30954 320 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 HSPE1P61604 102 aaKnown RBP16.26■□□□□ 0.19
CRLF3-201ENST00000324238 DDB2Q92466 427 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 SGK494Q96LW2 274 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 NABP2Q9BQ15 211 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 NAT8BQ9UHF3 227 aa16.26■□□□□ 0.19
CRLF3-201ENST00000324238 HELTA6NFD8 242 aa16.25■□□□□ 0.19
CRLF3-201ENST00000324238 GUSBP1Q15486 140 aa16.25■□□□□ 0.19
CRLF3-201ENST00000324238 UHRF2Q96PU4 802 aa16.25■□□□□ 0.19
CRLF3-201ENST00000324238 J3QR06 171 aa16.25■□□□□ 0.19
CRLF3-201ENST00000324238 ZNF25P17030 456 aaPredicted RBP16.25■□□□□ 0.19
CRLF3-201ENST00000324238 GNG4P50150 75 aa16.25■□□□□ 0.19
CRLF3-201ENST00000324238 YPEL3P61236 119 aaPredicted RBP16.25■□□□□ 0.19
CRLF3-201ENST00000324238 ZNF891A8MT65 544 aaPredicted RBP16.24■□□□□ 0.19
CRLF3-201ENST00000324238 PMCHP20382 165 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 ZNF503Q96F45 646 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 RCHY1Q96PM5 261 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 GNB4Q9HAV0 340 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 ABCA4P78363 2273 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 M0R143 59 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 PRB4P10163 310 aaPredicted RBP16.24■□□□□ 0.19
CRLF3-201ENST00000324238 LGALS4P56470 323 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 FAM27E3Q08E93 113 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 LOXL4Q96JB6 756 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 NEU1Q99519 415 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 V9GYV3 84 aa16.24■□□□□ 0.19
CRLF3-201ENST00000324238 TLN1Q9Y490 2541 aaKnown RBP16.24■□□□□ 0.19
CRLF3-201ENST00000324238 IRF2P14316 349 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 SSBP2P81877 361 aaPredicted RBP16.23■□□□□ 0.19
CRLF3-201ENST00000324238 RPEL1Q2QD12 228 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 ZNF474Q6S9Z5 364 aaPredicted RBP16.23■□□□□ 0.19
CRLF3-201ENST00000324238 OR2T6Q8NHC8 308 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 ASCL3Q9NQ33 180 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 FAM19A2Q8N3H0 131 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 FAM168AQ92567 244 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 GGTLC3B5MD39 225 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 PLAUP00749 431 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 IGLV1-44P01699 117 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 TMPRSS3P57727 454 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 TPPP2P59282 170 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 TPTE2P1Q5T6R2 138 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 MBNL2Q5VZF2 373 aaKnown RBP16.23■□□□□ 0.19
CRLF3-201ENST00000324238 FBXL7Q9UJT9 491 aa16.23■□□□□ 0.19
CRLF3-201ENST00000324238 ZNF318Q5VUA4 2279 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 ASH1LQ9NR48 2969 aaKnown RBP16.22■□□□□ 0.19
CRLF3-201ENST00000324238 F2RL2O00254 374 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 RAB31Q13636 194 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 AARDQ4LEZ3 155 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 OR52E5Q8NH55 327 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 PLEKHA3Q9HB20 300 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 TMEM14BQ9NUH8 114 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 MUC6Q6W4X9 2439 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 TRAV34A0A0B4J273 112 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 A8MXE2 369 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 E7EUB6 86 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 TFPI2P48307 235 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 PPP1R35Q8TAP8 253 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 BTF3L4Q96K17 158 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 PLSCR4Q9NRQ2 329 aa16.22■□□□□ 0.19
CRLF3-201ENST00000324238 BSNQ9UPA5 3926 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 TDGF1P3P51864 188 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 PRR20EP86478 221 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 PRR20CP86479 221 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 PRR20DP86480 221 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 PRR20BP86481 221 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 PRR20AP86496 221 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 ATOH7Q8N100 152 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 OR5AU1Q8NGC0 362 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 SLC25A15Q9Y619 301 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 APELAP0DMC3 54 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 CCL8P80075 99 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 PRB3Q04118 309 aaPredicted RBP16.21■□□□□ 0.19
CRLF3-201ENST00000324238 C10orf55Q5SWW7 151 aa16.21■□□□□ 0.19
CRLF3-201ENST00000324238 KIR2DL5BA0A0G2JN68 375 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms