RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 C1orf147Q96MC9 270 aaPredicted RBP13.78□□□□□ -0.2
CLIP4-201ENST00000320081 TRAV3A0A0B4J244 114 aa13.77□□□□□ -0.2
CLIP4-201ENST00000320081 CXCL1P09341 107 aa13.77□□□□□ -0.2
CLIP4-201ENST00000320081 HINT1P49773 126 aaPredicted RBP13.77□□□□□ -0.2
CLIP4-201ENST00000320081 HERPUD1Q15011 391 aa13.77□□□□□ -0.2
CLIP4-201ENST00000320081 ZNF324BQ6AW86 544 aaPredicted RBP13.77□□□□□ -0.2
CLIP4-201ENST00000320081 SFRP2Q96HF1 295 aa13.77□□□□□ -0.2
CLIP4-201ENST00000320081 RNASE7Q9H1E1 156 aaKnown RBP13.77□□□□□ -0.2
CLIP4-201ENST00000320081 HIGD1AQ9Y241 93 aa13.77□□□□□ -0.2
CLIP4-201ENST00000320081 SAA2-SAA4A0A096LPE2 208 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 LY6HO94772 140 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 IGKV1-5P01602 117 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 SAA2P0DJI9 122 aaPredicted RBP13.77□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H1EP10412 219 aaKnown RBP13.77□□□□□ -0.21
CLIP4-201ENST00000320081 CCKARP32238 428 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 PKIAP61925 76 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 WDR31Q8NA23 367 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 DERL1Q9BUN8 251 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 MPDU1O75352 247 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 DDTP30046 118 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 BRS3P32247 399 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 RELBQ01201 579 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 TIMM23BQ5SRD1 257 aa13.77□□□□□ -0.21
CLIP4-201ENST00000320081 RBM14Q96PK6 669 aaKnown RBP13.77□□□□□ -0.21
CLIP4-201ENST00000320081 B3GALT5-AS1P59052 145 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 LY6EQ16553 131 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 RSPO1Q2MKA7 263 aaPredicted RBP13.76□□□□□ -0.21
CLIP4-201ENST00000320081 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 OR4C13Q8NGP0 309 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 OR9G1Q8NH87 305 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 JMJD1CQ15652 2540 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 NAV2Q8IVL1 2488 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 DLX1P56177 255 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
CLIP4-201ENST00000320081 ZNF430Q9H8G1 570 aaPredicted RBP13.76□□□□□ -0.21
CLIP4-201ENST00000320081 RNF24Q9Y225 148 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 IGHV1-69-2A0A0G2JMI3 117 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 HIVEP2P31629 2446 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 ZNF503-AS2A6NEH8 195 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 RPL23P62829 140 aaKnown RBP13.76□□□□□ -0.21
CLIP4-201ENST00000320081 ZNF497Q6ZNH5 498 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 RPRMLQ8N4K4 120 aa13.76□□□□□ -0.21
CLIP4-201ENST00000320081 PLXNA4Q9HCM2 1894 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 SNAI2O43623 268 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 SRSF12Q8WXF0 261 aaKnown RBP13.75□□□□□ -0.21
CLIP4-201ENST00000320081 NACAE9PAV3 2078 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 IGHV1-18A0A0C4DH31 117 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 PYYP10082 97 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 ERASQ7Z444 233 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 SCNM1Q9BWG6 230 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 FRMPD3Q5JV73 1810 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 ST6GALNAC6Q969X2 333 aa13.75□□□□□ -0.21
CLIP4-201ENST00000320081 PSMG3Q9BT73 122 aaPredicted RBP13.75□□□□□ -0.21
CLIP4-201ENST00000320081 COLCA2A8K830 154 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 IL4P05112 153 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 KIR2DL2P43627 348 aaPredicted RBP13.74□□□□□ -0.21
CLIP4-201ENST00000320081 MLANAQ16655 118 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 SPSB4Q96A44 273 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 TMEM106BQ9NUM4 274 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 ZFYVE26Q68DK2 2539 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 IQCF6A8MYZ5 107 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BKO60814 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BJP06899 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 SMIM17P0DL12 118 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BOP23527 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BBP33778 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BDP58876 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BCP62807 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST2H2BEQ16778 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BHQ93079 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BNQ99877 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 HIST1H2BMQ99879 126 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 PROK2Q9HC23 129 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 GOLT1BQ9Y3E0 138 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 IGKV1-6A0A0C4DH72 117 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 DLL1O00548 723 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 RBFOX2O43251 390 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLIP4-201ENST00000320081 TMEM50AO95807 157 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 GNG5P63218 68 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 CYP2G1PQ6ZSU1 146 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 C1QL4Q86Z23 238 aa13.74□□□□□ -0.21
CLIP4-201ENST00000320081 KBTBD11-OT1A0A1B0GTJ5 212 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 MORN2Q502X0 79 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 GBGT1Q8N5D6 347 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 SAA1P0DJI8 122 aaPredicted RBP13.73□□□□□ -0.21
CLIP4-201ENST00000320081 SNRNP40Q96DI7 357 aaKnown RBP13.73□□□□□ -0.21
CLIP4-201ENST00000320081 HSPB7Q9UBY9 170 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 LY6G6EA0A0G2JKS1 128 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 TMEM250H0YL14 139 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 OR4A5Q8NH83 315 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 PMCHL2Q9BQD1 86 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 SSBP4Q9BWG4 385 aaPredicted RBP13.73□□□□□ -0.21
CLIP4-201ENST00000320081 KLK15Q9H2R5 256 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 U3KQA8 63 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 LINC00473A8K010 186 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 AMY1AP04745 511 aa13.73□□□□□ -0.21
CLIP4-201ENST00000320081 CD5P06127 495 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms