RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 PDLIM4P50479 330 aa11.77□□□□□ -0.53
PABPC1-201ENST00000318607 MRPL49Q13405 166 aaKnown RBP11.77□□□□□ -0.53
PABPC1-201ENST00000318607 TNXAQ16473 311 aa11.77□□□□□ -0.53
PABPC1-201ENST00000318607 COQ2Q96H96 371 aa11.77□□□□□ -0.53
PABPC1-201ENST00000318607 TCF19Q9Y242 345 aa11.77□□□□□ -0.53
PABPC1-201ENST00000318607 WDR83OSQ9Y284 106 aa11.77□□□□□ -0.53
PABPC1-201ENST00000318607 LSM4Q9Y4Z0 139 aaKnown RBP11.77□□□□□ -0.53
PABPC1-201ENST00000318607 RHOBP62745 196 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 DCAF12Q5T6F0 453 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 NCOR1P1Q9H4R4 102 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 NCKAP5O14513 1909 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 LY6G6EA0A0G2JKS1 128 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A10PA6NDY2 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A18PA6NE21 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A16PA6NEW6 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A20PA6NIJ5 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A8PA6NJQ4 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A7PA6NKC0 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A22PA8MWA6 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A12PA8MX19 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A5PA8MXJ8 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A23PA8MXZ1 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A15PP0C7V4 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A13PP0C7W8 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A14PP0C7W9 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A24PP0C7X0 464 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 NPY1RP25929 384 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 SLAQ13239 276 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 LEMD1Q68G75 181 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 OR10W1Q8NGF6 305 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 U3KQA8 63 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 FXYD7P58549 80 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 KLF14Q8TD94 323 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-201ENST00000318607 TRIB1Q96RU8 372 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 RNF2Q99496 336 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 ZFP30Q9Y2G7 519 aa11.76□□□□□ -0.53
PABPC1-201ENST00000318607 MRPS18CQ9Y3D5 142 aaKnown RBP11.76□□□□□ -0.53
PABPC1-201ENST00000318607 ORM2P19652 201 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 UBE2L3P68036 154 aaKnown RBP11.75□□□□□ -0.53
PABPC1-201ENST00000318607 FOXL1Q12952 345 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 TMEM116Q8NCL8 245 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 ALKBH7Q9BT30 221 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-201ENST00000318607 BET1LQ9NYM9 111 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 CORTO00230 105 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 MLNRO43193 412 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 NUDT3O95989 172 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 MPV17L2Q567V2 206 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 WDR73Q6P4I2 378 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 COLCA1Q6ZS62 124 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 C1orf122Q6ZSJ8 110 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
PABPC1-201ENST00000318607 SNRNP40Q96DI7 357 aaKnown RBP11.75□□□□□ -0.53
PABPC1-201ENST00000318607 FBLL1A6NHQ2 334 aaKnown RBP11.74□□□□□ -0.53
PABPC1-201ENST00000318607 PMS2P5A8MQ11 134 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 MT-CO2P00403 227 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 TMEM144Q7Z5S9 345 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 C1orf174Q8IYL3 243 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 TAAR6Q96RI8 345 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 OOEPA6NGQ2 149 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 CA7P43166 264 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 GABRA6Q16445 453 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 DUX4L9Q6RFH8 374 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-201ENST00000318607 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 RNF138Q8WVD3 245 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 LOXL4Q96JB6 756 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 NABP2Q9BQ15 211 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 SH2D2AQ9NP31 389 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 TYMSP04818 313 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 LGALS4P56470 323 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 LINC00173Q6ZV60 143 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 MUC15Q8N387 334 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 C22orf15Q8WYQ4 148 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 NPVFQ9HCQ7 196 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 TIMM9Q9Y5J7 89 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 SPG11Q96JI7 2443 aa11.74□□□□□ -0.53
PABPC1-201ENST00000318607 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-201ENST00000318607 SLC25A17O43808 307 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-201ENST00000318607 NDUFB8O95169 186 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 BMI1P35226 326 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 MEOX1P50221 254 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 CLDN18P56856 261 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 SELENOVP59797 346 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 IL11RAQ14626 422 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 OR4A47Q6IF82 309 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 CDC42EP3Q9UKI2 254 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 STAG3L2P0CL84 134 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 STAG3L3P0CL85 134 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 PPOXP50336 477 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 ZCCHC24Q8N2G6 241 aaKnown RBP11.73□□□□□ -0.53
PABPC1-201ENST00000318607 TCTEX1D1Q8N7M0 179 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 ZNF738Q8NE65 137 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 BMPR1BO00238 502 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 TOX3O15405 576 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-201ENST00000318607 IGLC2P0DOY2 106 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 ZNF134P52741 427 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms