RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 KCNS1Q96KK3 526 aa15.63■□□□□ 0.09
RTN4-201ENST00000317610 IGKV1OR2-108A0A075B7D4 117 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 KBTBD11-OT1A0A1B0GTJ5 212 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 SMIM27A0A1W2PRY6 76 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 CTRLP40313 264 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 ATP5IP56385 69 aaPredicted RBP15.62■□□□□ 0.09
RTN4-201ENST00000317610 MRPS11P82912 194 aaKnown RBP15.62■□□□□ 0.09
RTN4-201ENST00000317610 IGF2BP2-AS1Q96M15 143 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 PLEKHA3Q9HB20 300 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 TBL2Q9Y4P3 447 aaKnown RBP15.62■□□□□ 0.09
RTN4-201ENST00000317610 PRR33A8MZF0 331 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 MMP23AO75900 390 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 AMY1AP04745 511 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 REG1AP05451 166 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 SPRNQ5BIV9 151 aa15.62■□□□□ 0.09
RTN4-201ENST00000317610 A0A1W2PRE2 83 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 A6NNC1 897 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 J3QR06 171 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 UPK2O00526 184 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 PPOXP50336 477 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 TAS2R45P59539 299 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 LPAR2Q9HBW0 351 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 NRN1Q9NPD7 142 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 ZNF71Q9NQZ8 489 aaPredicted RBP15.61■□□□□ 0.09
RTN4-201ENST00000317610 A0A1W2PS18 150 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 DIRC3C9JPN6 131 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 HLA-DQA1P01909 254 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 C2orf83Q53S99 150 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 MOGAT3Q86VF5 341 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 FAM122AQ96E09 287 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 OR2V2Q96R30 315 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 GOLT1BQ9Y3E0 138 aa15.61■□□□□ 0.09
RTN4-201ENST00000317610 TANC2Q9HCD6 1990 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 BMPR1BO00238 502 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 KRTDAPP60985 99 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 FXYD3Q14802 87 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 FAM103A1Q9BTL3 118 aaKnown RBP15.6■□□□□ 0.09
RTN4-201ENST00000317610 HINT2Q9BX68 163 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 PPP1R14DQ9NXH3 145 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 SLC25A15Q9Y619 301 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 ZNF253O75346 499 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 AMTP48728 403 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 DHRS13Q6UX07 377 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 MOB3BQ86TA1 216 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 LYG1Q8N1E2 194 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 FAM222BQ8WU58 562 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 RCHY1Q96PM5 261 aa15.6■□□□□ 0.09
RTN4-201ENST00000317610 HEATR1Q9H583 2144 aaKnown RBP15.59■□□□□ 0.09
RTN4-201ENST00000317610 KNTC1P50748 2209 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 OR7C2O60412 319 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 ZNF83P51522 516 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 IBA57Q5T440 356 aaKnown RBP15.59■□□□□ 0.09
RTN4-201ENST00000317610 BHLHA15Q7RTS1 189 aaPredicted RBP15.59■□□□□ 0.09
RTN4-201ENST00000317610 DSCAMO60469 2012 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 SPINK4O60575 86 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 KIAA1644Q3SXP7 199 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 HES3Q5TGS1 186 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 OR1L8Q8NGR8 309 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 SLC25A33Q9BSK2 321 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 LINC00574Q9H8X3 128 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 CDC42EP3Q9UKI2 254 aa15.59■□□□□ 0.09
RTN4-201ENST00000317610 ZNF324O75467 553 aaPredicted RBP15.58■□□□□ 0.08
RTN4-201ENST00000317610 LINC00614P0C842 121 aa15.58■□□□□ 0.08
RTN4-201ENST00000317610 C8orf88P0DMB2 117 aa15.58■□□□□ 0.08
RTN4-201ENST00000317610 MRPL32Q9BYC8 188 aaKnown RBP15.58■□□□□ 0.08
RTN4-201ENST00000317610 COMMD5Q9GZQ3 224 aa15.58■□□□□ 0.08
RTN4-201ENST00000317610 DKK4Q9UBT3 224 aa15.58■□□□□ 0.08
RTN4-201ENST00000317610 TEX50A0A1B0GTY4 177 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 IZUMO1RA6ND01 250 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 CDX4O14627 284 aaPredicted RBP15.57■□□□□ 0.08
RTN4-201ENST00000317610 NPSP0C0P6 89 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 GATA2P23769 480 aaPredicted RBP15.57■□□□□ 0.08
RTN4-201ENST00000317610 SRIP30626 198 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 TCL1AP56279 114 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 SUMO1P63165 101 aaKnown RBP15.57■□□□□ 0.08
RTN4-201ENST00000317610 SARAFQ96BY9 339 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 ZDBF2Q9HCK1 2354 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 PSMB11A5LHX3 300 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 RNASE2P10153 161 aaKnown RBP15.57■□□□□ 0.08
RTN4-201ENST00000317610 NIT1Q86X76 327 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 WIPF2Q8TF74 440 aaPredicted RBP15.57■□□□□ 0.08
RTN4-201ENST00000317610 STARD4Q96DR4 205 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 PROCRQ9UNN8 238 aa15.57■□□□□ 0.08
RTN4-201ENST00000317610 SRRM4A7MD48 611 aaKnown RBP15.56■□□□□ 0.08
RTN4-201ENST00000317610 CT45A6P0DMU7 189 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 CT45A5P0DMU8 189 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 CT45A7P0DMV0 189 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 PRRX1P54821 245 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 SLC35B1P78383 322 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 FAM167A-AS1Q96KT0 104 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 BET1LQ9NYM9 111 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 GATA4P43694 442 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 CD69Q07108 199 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 TMEM30BQ3MIR4 351 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 SPATA45Q537H7 98 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 COL5A1-AS1Q5SY13 56 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 MRPL54Q6P161 138 aaKnown RBP15.56■□□□□ 0.08
RTN4-201ENST00000317610 RASL11AQ6T310 242 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 OR5B3Q8NH48 314 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 OR9G1Q8NH87 305 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms