RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 SLC25A33Q9BSK2 321 aa17.91■□□□□ 0.46
IRF3-201ENST00000309877 GGACTQ9BVM4 153 aa17.91■□□□□ 0.46
IRF3-201ENST00000309877 H3BUX3 64 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 REG1AP05451 166 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 APELAP0DMC3 54 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 CX3CL1P78423 397 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 AANATQ16613 207 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 TMEM219Q86XT9 240 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 GNPNAT1Q96EK6 184 aaPredicted RBP17.9■□□□□ 0.46
IRF3-201ENST00000309877 SRSF8Q9BRL6 282 aaKnown RBP17.9■□□□□ 0.46
IRF3-201ENST00000309877 SLC25A32Q9H2D1 315 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 SEC11BP0C7V7 166 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 AREGP15514 252 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 ATP6V0CP27449 155 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 DEFB112Q30KQ8 113 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 BCL6BQ8N143 479 aaPredicted RBP17.9■□□□□ 0.46
IRF3-201ENST00000309877 C22orf15Q8WYQ4 148 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 P2RX4Q99571 388 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 SH3BGRL3Q9H299 93 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 MOB4Q9Y3A3 225 aa17.9■□□□□ 0.46
IRF3-201ENST00000309877 SMCO3A2RU48 225 aa17.89■□□□□ 0.45
IRF3-201ENST00000309877 PRSS46E5RG02 174 aa17.89■□□□□ 0.45
IRF3-201ENST00000309877 HLA-DRB1P01911 266 aa17.89■□□□□ 0.45
IRF3-201ENST00000309877 SPP1P10451 314 aa17.89■□□□□ 0.45
IRF3-201ENST00000309877 DLK1P80370 383 aa17.89■□□□□ 0.45
IRF3-201ENST00000309877 TEX29Q8N6K0 151 aa17.89■□□□□ 0.45
IRF3-201ENST00000309877 PCNPQ8WW12 178 aaKnown RBP17.89■□□□□ 0.45
IRF3-201ENST00000309877 ARPC1AQ92747 370 aa17.89■□□□□ 0.45
IRF3-201ENST00000309877 PARD6GQ9BYG4 376 aaPredicted RBP17.89■□□□□ 0.45
IRF3-201ENST00000309877 WDR61Q9GZS3 305 aaKnown RBP17.89■□□□□ 0.45
IRF3-201ENST00000309877 MDFIC2A0A1B0GVS7 189 aa17.88■□□□□ 0.45
IRF3-201ENST00000309877 LY6EQ16553 131 aa17.88■□□□□ 0.45
IRF3-201ENST00000309877 VWC2Q2TAL6 325 aa17.88■□□□□ 0.45
IRF3-201ENST00000309877 CLLU1Q5K131 121 aa17.88■□□□□ 0.45
IRF3-201ENST00000309877 PITPNC1Q9UKF7 332 aa17.88■□□□□ 0.45
IRF3-201ENST00000309877 CSMD1Q96PZ7 3565 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 RUNX1Q01196 453 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 C9orf139Q6ZV77 190 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 RNF141Q8WVD5 230 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 FAM103A1Q9BTL3 118 aaKnown RBP17.87■□□□□ 0.45
IRF3-201ENST00000309877 ITPR2Q14571 2701 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 CREBBPQ92793 2442 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 FGF16O43320 207 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 C5orf56Q8N8D9 126 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 ZNF114Q8NC26 417 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 OR2G3Q8NGZ4 309 aa17.87■□□□□ 0.45
IRF3-201ENST00000309877 RNASEH2CQ8TDP1 164 aaKnown RBP17.87■□□□□ 0.45
IRF3-201ENST00000309877 TAF15Q92804 592 aaKnown RBP eCLIP17.87■□□□□ 0.452e-8■■□□□ 13.9
IRF3-201ENST00000309877 IGHV7-81A0A0B4J1V7 117 aa17.86■□□□□ 0.45
IRF3-201ENST00000309877 A6NDX4 124 aa17.86■□□□□ 0.45
IRF3-201ENST00000309877 FGF7P21781 194 aa17.86■□□□□ 0.45
IRF3-201ENST00000309877 NDUFA5Q16718 116 aa17.86■□□□□ 0.45
IRF3-201ENST00000309877 CCDC168Q8NDH2 2452 aa17.86■□□□□ 0.45
IRF3-201ENST00000309877 LRRC20Q8TCA0 184 aa17.86■□□□□ 0.45
IRF3-201ENST00000309877 RPS10-NUDT3A0A1W2PQS6 291 aa17.85■□□□□ 0.45
IRF3-201ENST00000309877 OR1P1Q8NH06 330 aa17.85■□□□□ 0.45
IRF3-201ENST00000309877 NPVFQ9HCQ7 196 aa17.85■□□□□ 0.45
IRF3-201ENST00000309877 SVEP1Q4LDE5 3571 aa17.85■□□□□ 0.45
IRF3-201ENST00000309877 CD5LO43866 347 aa17.84■□□□□ 0.45
IRF3-201ENST00000309877 NMBP08949 121 aa17.84■□□□□ 0.45
IRF3-201ENST00000309877 SULT1A2P50226 295 aa17.84■□□□□ 0.45
IRF3-201ENST00000309877 NDPQ00604 133 aa17.84■□□□□ 0.45
IRF3-201ENST00000309877 SPNS3Q6ZMD2 512 aa17.84■□□□□ 0.45
IRF3-201ENST00000309877 TMEM182Q6ZP80 229 aaPredicted RBP17.84■□□□□ 0.45
IRF3-201ENST00000309877 RSG1Q9BU20 258 aa17.84■□□□□ 0.45
IRF3-201ENST00000309877 F11RQ9Y624 299 aaKnown RBP17.84■□□□□ 0.45
IRF3-201ENST00000309877 RFNGQ9Y644 331 aa17.84■□□□□ 0.45
IRF3-201ENST00000309877 FNDC10F2Z333 226 aa17.83■□□□□ 0.45
IRF3-201ENST00000309877 DEFA4P12838 97 aa17.83■□□□□ 0.45
IRF3-201ENST00000309877 GPX4P36969 197 aaPredicted RBP17.83■□□□□ 0.45
IRF3-201ENST00000309877 AKR1C1Q04828 323 aa17.83■□□□□ 0.45
IRF3-201ENST00000309877 CD69Q07108 199 aa17.83■□□□□ 0.45
IRF3-201ENST00000309877 ARSJQ5FYB0 599 aaPredicted RBP17.83■□□□□ 0.45
IRF3-201ENST00000309877 BTNL8Q6UX41 500 aa17.83■□□□□ 0.45
IRF3-201ENST00000309877 HSPB9Q9BQS6 159 aa17.83■□□□□ 0.45
IRF3-201ENST00000309877 WDR83OSQ9Y284 106 aa17.83■□□□□ 0.45
IRF3-201ENST00000309877 ABCA1O95477 2261 aa17.83■□□□□ 0.45
IRF3-201ENST00000309877 ITPR3Q14573 2671 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 M0QZK8 103 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 FAM157CP0CG43 387 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 OPRK1P41145 380 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 C19orf35Q6ZS72 473 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 ZNF709Q8N972 641 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 CACNG8Q8WXS5 425 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 MISP3Q96FF7 219 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 WNT10AQ9GZT5 417 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 PARP11Q9NR21 331 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 PLA2G2EQ9NZK7 142 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 PLXNB1O43157 2135 aa17.83■□□□□ 0.44
IRF3-201ENST00000309877 SH2D7A6NKC9 451 aaPredicted RBP17.82■□□□□ 0.44
IRF3-201ENST00000309877 ZNF705EA8MWA4 302 aaPredicted RBP17.82■□□□□ 0.44
IRF3-201ENST00000309877 IGHV4-59P01825 116 aa17.82■□□□□ 0.44
IRF3-201ENST00000309877 CTRB1P17538 263 aa17.82■□□□□ 0.44
IRF3-201ENST00000309877 CTRB2Q6GPI1 263 aa17.82■□□□□ 0.44
IRF3-201ENST00000309877 TREML4Q6UXN2 200 aa17.82■□□□□ 0.44
IRF3-201ENST00000309877 C16orf82Q7Z2V1 217 aa17.82■□□□□ 0.44
IRF3-201ENST00000309877 PSMG3Q9BT73 122 aaPredicted RBP17.82■□□□□ 0.44
IRF3-201ENST00000309877 YAE1D1Q9NRH1 226 aa17.82■□□□□ 0.44
IRF3-201ENST00000309877 FBXO7Q9Y3I1 522 aa17.82■□□□□ 0.44
IRF3-201ENST00000309877 BTBD17A6NE02 478 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms