RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 TM4SF20Q53R12 229 aa12.8□□□□□ -0.36
DDB1-201ENST00000301764 NCBP2LA6PVI3 153 aaKnown RBP12.8□□□□□ -0.36
DDB1-201ENST00000301764 ZNF841Q6ZN19 808 aa12.8□□□□□ -0.36
DDB1-201ENST00000301764 HIGD1AQ9Y241 93 aa12.8□□□□□ -0.36
DDB1-201ENST00000301764 IGLV3-12A0A075B6K2 115 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 C3orf79P0CE67 100 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 CDKN1AP38936 164 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 FOXG1P55316 489 aaPredicted RBP12.79□□□□□ -0.36
DDB1-201ENST00000301764 PAX9P55771 341 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 SNRNP40Q96DI7 357 aaKnown RBP12.79□□□□□ -0.36
DDB1-201ENST00000301764 GRAMD2BQ96HH9 432 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 C19orf24Q9BVV8 132 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 CKS2P33552 79 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
DDB1-201ENST00000301764 CCL8P80075 99 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
DDB1-201ENST00000301764 ZNF716A6NP11 495 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 GNG7O60262 68 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 LINC00271P0C7V0 271 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 ZNF726P1Q15940 193 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 OSTCQ9NRP0 149 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 PLXNA4Q9HCM2 1894 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 MOSP00540 346 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 STAG3L2P0CL84 134 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 STAG3L3P0CL85 134 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 ZNF146Q15072 292 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 SPATA31B1PQ5VZV4 182 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 ZNF497Q6ZNH5 498 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 BHLHA15Q7RTS1 189 aaPredicted RBP12.78□□□□□ -0.36
DDB1-201ENST00000301764 LINC00470Q9BZP3 86 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 RIF1Q5UIP0 2472 aaKnown RBP12.78□□□□□ -0.36
DDB1-201ENST00000301764 NOTCH4Q99466 2003 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 PEX7O00628 323 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 OR9G9P0C7N8 305 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 SLC25A17O43808 307 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 LILRA1O75019 489 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDB1-201ENST00000301764 GOLT1AQ6ZVE7 132 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 GGTLC1Q9BX51 225 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 CRIM1Q9NZV1 1036 aa12.78□□□□□ -0.36
DDB1-201ENST00000301764 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.36
DDB1-201ENST00000301764 HILPDAQ9Y5L2 63 aa12.77□□□□□ -0.36
DDB1-201ENST00000301764 CHD3Q12873 2000 aaKnown RBP12.77□□□□□ -0.36
DDB1-201ENST00000301764 PRRG2O14669 202 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 KLF7O75840 302 aaPredicted RBP12.77□□□□□ -0.37
DDB1-201ENST00000301764 GPX1P07203 203 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 RIPPLY3P57055 190 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 PSG7Q13046 419 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 AMMECR1LQ6DCA0 310 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 C20orf204Q6ZNR8 217 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 SEPSECSQ9HD40 501 aaKnown RBP12.77□□□□□ -0.37
DDB1-201ENST00000301764 A1L4Q6 167 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 CLDN18P56856 261 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 TMEM42Q69YG0 159 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 IMMP1LQ96LU5 166 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 C20orf144Q9BQM9 153 aa12.77□□□□□ -0.37
DDB1-201ENST00000301764 MRPL32Q9BYC8 188 aaKnown RBP12.77□□□□□ -0.37
DDB1-201ENST00000301764 H3BUT2 72 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 RPL27AP46776 148 aaKnown RBP12.76□□□□□ -0.37
DDB1-201ENST00000301764 PRRX1P54821 245 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 ACP7Q6ZNF0 438 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 GCSAMQ8N6F7 178 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 INSIG2Q9Y5U4 225 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 ALPK3Q96L96 1907 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
DDB1-201ENST00000301764 CDX2Q99626 313 aaPredicted RBP12.76□□□□□ -0.37
DDB1-201ENST00000301764 FNDC4Q9H6D8 234 aaPredicted RBP12.76□□□□□ -0.37
DDB1-201ENST00000301764 APOHP02749 345 aaPredicted RBP12.76□□□□□ -0.37
DDB1-201ENST00000301764 LINC00205P59089 165 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 UBE2V1Q13404 147 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 TWIST1Q15672 202 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 PEAR1Q5VY43 1037 aaPredicted RBP12.76□□□□□ -0.37
DDB1-201ENST00000301764 MAFAQ8NHW3 353 aaPredicted RBP12.76□□□□□ -0.37
DDB1-201ENST00000301764 CELA3BP08861 270 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 NBEAP1P0C6P0 100 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 CD40P25942 277 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 SLC25A33Q9BSK2 321 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 THYN1Q9P016 225 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 RNF115Q9Y4L5 304 aa12.76□□□□□ -0.37
DDB1-201ENST00000301764 TMEM189A5PLL7 270 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 RPL7P18124 248 aaKnown RBP12.75□□□□□ -0.37
DDB1-201ENST00000301764 DENND4AQ7Z401 1863 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 IFNL4K9M1U5 179 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 MPV17L2Q567V2 206 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 IFI27L2Q9H2X8 130 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 IGKV1D-33P01593 117 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 IGKV1-33P01594 117 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 GPR183P32249 361 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 MEGF9Q9H1U4 602 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 ONECUT1Q9UBC0 465 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 SLC25A10Q9UBX3 287 aaPredicted RBP12.75□□□□□ -0.37
DDB1-201ENST00000301764 DENND4CQ5VZ89 1909 aa12.75□□□□□ -0.37
DDB1-201ENST00000301764 TSPOP30536 169 aa12.74□□□□□ -0.37
DDB1-201ENST00000301764 TMEM136Q6ZRR5 245 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms