RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PSG9Q00887 426 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 TMEM95Q3KNT9 176 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 SPATA31B1PQ5VZV4 182 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 TMEM219Q86XT9 240 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 NPIPB11E5RHQ5 1161 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 OR9G9P0C7N8 305 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 ZNF146Q15072 292 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 DUX3Q96PT4 197 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 LILRA1O75019 489 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 SLC25A34Q6PIV7 304 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 Q9H3A6 140 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 NSUN5P1Q3KNT7 163 aa12.96□□□□□ -0.34
FNDC1-201ENST00000297267 EEF1AKMT3Q96AZ1 226 aa12.96□□□□□ -0.34
FNDC1-201ENST00000297267 MRPL16Q9NX20 251 aaKnown RBP12.96□□□□□ -0.34
FNDC1-201ENST00000297267 KNTC1P50748 2209 aa12.96□□□□□ -0.34
FNDC1-201ENST00000297267 DPRXA6NFQ7 191 aa12.96□□□□□ -0.34
FNDC1-201ENST00000297267 MC5RP33032 325 aa12.96□□□□□ -0.34
FNDC1-201ENST00000297267 JPT1Q9UK76 154 aa12.96□□□□□ -0.34
FNDC1-201ENST00000297267 LEPP41159 167 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 FAM159AQ6UWV7 190 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 LINC00587B1AMM8 73 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 CD1AP06126 327 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 PAQR4Q8N4S7 273 aaPredicted RBP12.95□□□□□ -0.34
FNDC1-201ENST00000297267 CLDND2Q8NHS1 167 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 UQCR10Q9UDW1 63 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 MYLKQ15746 1914 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 HLA-DRB1P01911 266 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 ZNRD1Q9P1U0 126 aa12.95□□□□□ -0.34
FNDC1-201ENST00000297267 FADS6Q8N9I5 356 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 PKIBQ9C010 78 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 OR10AG1Q8NH19 301 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 PRELID3AQ96N28 172 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 LCNL1Q6ZST4 164 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 LY6HO94772 140 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 LIPFP07098 398 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 SRP19P09132 144 aaKnown RBP12.94□□□□□ -0.34
FNDC1-201ENST00000297267 HBBP68871 147 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 NUDT11Q96G61 164 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 CACNA1IQ9P0X4 2223 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 HIGD1CA8MV81 97 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 OR9G1Q8NH87 305 aa12.94□□□□□ -0.34
FNDC1-201ENST00000297267 IGKV1-9A0A0C4DH69 117 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 C18orf12Q96KH6 178 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 GEMIN7Q9H840 131 aaKnown RBP12.93□□□□□ -0.34
FNDC1-201ENST00000297267 MLNRO43193 412 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 CA11O75493 328 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 C1orf174Q8IYL3 243 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 PCP4P48539 62 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 OR5AN1Q8NGI8 311 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 CEACAM4O75871 244 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 WDYHV1Q96HA8 205 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 NBEAP1P0C6P0 100 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 NUP37Q8NFH4 326 aa12.93□□□□□ -0.34
FNDC1-201ENST00000297267 MPDU1O75352 247 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 SOX21Q9Y651 276 aaPredicted RBP12.92□□□□□ -0.34
FNDC1-201ENST00000297267 SERF1AO75920 110 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 MOB4Q9Y3A3 225 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 PTPRDP23468 1912 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 IGKV2-40A0A087WW87 121 aaPredicted RBP12.92□□□□□ -0.34
FNDC1-201ENST00000297267 IGKV2D-40P01614 121 aaPredicted RBP12.92□□□□□ -0.34
FNDC1-201ENST00000297267 HLA-DQA1P01909 254 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 TBR1Q16650 682 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 C10orf55Q5SWW7 151 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 Q6ZT83 130 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 LINC01587Q99440 93 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 SMIM13P0DJ93 91 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 COLCA1Q6ZS62 124 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 PPP1R27Q86WC6 154 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 TMEM183AQ8IXX5 376 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 DNASE2BQ8WZ79 361 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 IFI27L2Q9H2X8 130 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 LTBRP36941 435 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 IL36BQ9NZH7 164 aa12.92□□□□□ -0.34
FNDC1-201ENST00000297267 YLPM1P49750 1951 aaKnown RBP12.92□□□□□ -0.34
FNDC1-201ENST00000297267 NDPQ00604 133 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 FAM106AQ4KMX7 169 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 TRAV3A0A0B4J244 114 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 RPL15P61313 204 aaKnown RBP12.91□□□□□ -0.34
FNDC1-201ENST00000297267 ZNF414Q96IQ9 312 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 RAX2Q96IS3 184 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 PTGDSP41222 190 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 CACNG7P62955 275 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 FAM181AQ8N9Y4 354 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 F8VVB4 439 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 F8VWA3 439 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 OR52E5Q8NH55 327 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 SCGB3A1Q96QR1 104 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 CRIM1Q9NZV1 1036 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 GALNT14Q96FL9 552 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 A0A1W2PS18 150 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 H0YIZ8 118 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 ARPC1AQ92747 370 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 DERL1Q9BUN8 251 aa12.91□□□□□ -0.34
FNDC1-201ENST00000297267 APOBEC3AP31941 199 aaPredicted RBP12.9□□□□□ -0.34
FNDC1-201ENST00000297267 A0A1B0GTI1 187 aa12.9□□□□□ -0.34
FNDC1-201ENST00000297267 NUDT10Q8NFP7 164 aa12.9□□□□□ -0.34
FNDC1-201ENST00000297267 TMEM70Q9BUB7 260 aa12.9□□□□□ -0.34
FNDC1-201ENST00000297267 RPUSD1Q9UJJ7 312 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms