RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 CACNG8Q8WXS5 425 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 TREML4Q6UXN2 200 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 DSCAML1Q8TD84 2053 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 VENTXO95231 258 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 TAS2R45P59539 299 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 RNASEH2CQ8TDP1 164 aaKnown RBP10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 RAB24Q969Q5 203 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 RASL11BQ9BPW5 248 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 NIPSNAP3BQ9BS92 247 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 NDUFA4L2Q9NRX3 87 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 ADGRG4Q8IZF6 3080 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 OVOL3O00110 214 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 NUPL2O15504 423 aaKnown RBP10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 ZFP36P26651 326 aaKnown RBP10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 OR10J1P30954 320 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 KHDC3LQ587J8 217 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 TMEM144Q7Z5S9 345 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 Q8N7P7 452 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 SRSF12Q8WXF0 261 aaKnown RBP10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 RPS10P5Q9NQ39 176 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 TBL2Q9Y4P3 447 aaKnown RBP10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 FXYD3Q14802 87 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 VSIRQ9H7M9 311 aa10.62□□□□□ -0.71
PPP1CB-201ENST00000296122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.61□□□□□ -0.714e-8■■■■□ 25.5
PPP1CB-201ENST00000296122 ARHGAP32A7KAX9 2087 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 FABP1P07148 127 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 UBE2E1P51965 193 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 BPIFB3P59826 476 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 CD69Q07108 199 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 RNASE2P10153 161 aaKnown RBP10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 ACSM6Q6P461 480 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 MALSU1Q96EH3 234 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 PLA2G2EQ9NZK7 142 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 COX7A2P2O60397 106 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 OR5G3P0C626 314 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 BCL2P10415 239 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 GPX4P36969 197 aaPredicted RBP10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 CLEC12BQ2HXU8 276 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 ZNF674Q2M3X9 581 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 SLC35E3Q7Z769 313 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 EAF1Q96JC9 268 aaPredicted RBP10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 ZNF355PQ9NSJ1 428 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 VAX2Q9UIW0 290 aa10.61□□□□□ -0.71
PPP1CB-201ENST00000296122 PMS2P5A8MQ11 134 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 CNTFRP26992 372 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 LMO4P61968 165 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 FAM78BQ5VT40 261 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 STPG3Q8N7X2 389 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 OR1L6Q8NGR2 347 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 MANBALQ9NQG1 85 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 TPSG1Q9NRR2 321 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 LRRK2Q5S007 2527 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 IGHV3OR16-10A0A075B7F0 116 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 OR7C2O60412 319 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 EIF3GO75821 320 aaKnown RBP eCLIP10.6□□□□□ -0.712e-6■■■■■ 28.3
PPP1CB-201ENST00000296122 IL6RP08887 468 aaPredicted RBP10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 RND2P52198 227 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 OR4F5Q8NH21 305 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 C10orf105Q8TEF2 133 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 OR4F4Q96R69 305 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 P2RX4Q99571 388 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 C7orf69Q9H7B7 122 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 THYN1Q9P016 225 aa10.6□□□□□ -0.71
PPP1CB-201ENST00000296122 A0A1W2PPI3 338 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 MBD3L1Q8WWY6 194 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 NPIPB3Q92617 1050 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 RARRES2Q99969 163 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 GGTLC1Q9BX51 225 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 ABCA1O95477 2261 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 FNDC10F2Z333 226 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 HSPB1P04792 205 aaKnown RBP10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 SLC25A16P16260 332 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 HOXB4P17483 251 aaPredicted RBP10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 CCL20P78556 96 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 TRAV1-1A0A0B4J248 108 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 IGHV4-61A0A0C4DH41 118 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 CD5P06127 495 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 SELENOTP62341 195 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 VWC2Q2TAL6 325 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 C9orf152Q5JTZ5 239 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 RPP25LQ8N5L8 163 aaKnown RBP10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 SLC45A2Q9UMX9 530 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 USP24Q9UPU5 2620 aa10.59□□□□□ -0.71
PPP1CB-201ENST00000296122 B4DSR2 109 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 NPFFO15130 113 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 IGHV3-48P01763 117 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 SAA4P35542 130 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 UBE2G2P60604 165 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 GUCA2BQ16661 112 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 OR1L4Q8NGR5 311 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 RNF2Q99496 336 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 C20orf24Q9BUV8 137 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 ZZEF1O43149 2961 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 IGHV3-21A0A0B4J1V1 117 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 CXorf1O96002 111 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 IGLV2-23P01705 113 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 PAX6P26367 422 aa10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 RPL29P47914 159 aaKnown RBP10.58□□□□□ -0.72
PPP1CB-201ENST00000296122 ARSJQ5FYB0 599 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms