RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 OR4F17Q8NGA8 305 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 GMPPAQ96IJ6 420 aaPredicted RBP13.15□□□□□ -0.3
USP43-201ENST00000285199 DENND4AQ7Z401 1863 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 IGKV3-7A0A075B6H7 116 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 M0QZ24 198 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 PYYP10082 97 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 TRAV3A0A0B4J244 114 aa13.14□□□□□ -0.31
USP43-201ENST00000285199 ORM1P02763 201 aa13.14□□□□□ -0.31
USP43-201ENST00000285199 UNC80Q8N2C7 3258 aa13.14□□□□□ -0.31
USP43-201ENST00000285199 A0A1W2PN81 502 aa13.14□□□□□ -0.31
USP43-201ENST00000285199 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
USP43-201ENST00000285199 UFC1Q9Y3C8 167 aa13.14□□□□□ -0.31
USP43-201ENST00000285199 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
USP43-201ENST00000285199 A0A1B0GW64 132 aa13.14□□□□□ -0.31
USP43-201ENST00000285199 SRSF12Q8WXF0 261 aaKnown RBP13.14□□□□□ -0.31
USP43-201ENST00000285199 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.13□□□□□ -0.31
USP43-201ENST00000285199 TRAV5A0A0B4J249 113 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 K7ESF4 209 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 GCSHP23434 173 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 ZNF114Q8NC26 417 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 AAMDCQ9H7C9 122 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 LPAR2Q9HBW0 351 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 BPTFQ12830 3046 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 WNK1Q9H4A3 2382 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 C2CD3Q4AC94 2353 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 TRAV1-1A0A0B4J248 108 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 PPIAL4DF5H284 164 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 TNFSF13O75888 250 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 MRPL14Q6P1L8 145 aaKnown RBP13.13□□□□□ -0.31
USP43-201ENST00000285199 OR9G1Q8NH87 305 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 LINC00479Q96M42 142 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 HILPDAQ9Y5L2 63 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 MALRD1Q5VYJ5 2156 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 RANBP2P49792 3224 aaKnown RBP13.13□□□□□ -0.31
USP43-201ENST00000285199 BTF3P20290 206 aaKnown RBP13.13□□□□□ -0.31
USP43-201ENST00000285199 NTF4P34130 210 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 LRRC10Q5BKY1 277 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 TMEM116Q8NCL8 245 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 RPEQ96AT9 228 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 C18orf15Q96N68 181 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 HIGD1CA8MV81 97 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 MLANAQ16655 118 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 DTX1Q86Y01 620 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 BEND2Q8NDZ0 799 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 TMEM70Q9BUB7 260 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 ELOVL5Q9NYP7 299 aa13.13□□□□□ -0.31
USP43-201ENST00000285199 DYSFO75923 2080 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 IGLV3-12A0A075B6K2 115 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 LNP1A1A4G5 178 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 EFNB3Q15768 340 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 ZCCHC24Q8N2G6 241 aaKnown RBP13.12□□□□□ -0.31
USP43-201ENST00000285199 ADTRPQ96IZ2 230 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 CHRNA10Q9GZZ6 450 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 KIR2DS2P43631 304 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 ZNF585BQ52M93 769 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 TREML4Q6UXN2 200 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 RNF7Q9UBF6 113 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 CGB1A6NKQ9 187 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 J3QR89 54 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 ZNF324O75467 553 aaPredicted RBP13.12□□□□□ -0.31
USP43-201ENST00000285199 TDRG1Q3Y452 100 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 GOLT1AQ6ZVE7 132 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 FAM214BQ7L5A3 538 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 TNFRSF19Q9NS68 423 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 PPP1R14DQ9NXH3 145 aa13.12□□□□□ -0.31
USP43-201ENST00000285199 PCDH15Q96QU1 1955 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 PLXNA2O75051 1894 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 CD40P25942 277 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 ACTL10Q5JWF8 245 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 WDR83OSQ9Y284 106 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 TNFRSF1AP19438 455 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 INO80CQ6PI98 192 aaPredicted RBP13.11□□□□□ -0.31
USP43-201ENST00000285199 DNASE2BQ8WZ79 361 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 HSPB7Q9UBY9 170 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 LSM4Q9Y4Z0 139 aaKnown RBP13.11□□□□□ -0.31
USP43-201ENST00000285199 TMEM210A6NLX4 147 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 KLF7O75840 302 aaPredicted RBP13.11□□□□□ -0.31
USP43-201ENST00000285199 FOXF2Q12947 444 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 ONECUT1Q9UBC0 465 aa13.11□□□□□ -0.31
USP43-201ENST00000285199 LINC00473A8K010 186 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 PERPQ96FX8 193 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 AGMATQ9BSE5 352 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 HSPB8Q9UJY1 196 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 NKX2-8O15522 239 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 HYPMO75409 117 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 ZNF138P52744 262 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 RIPPLY3P57055 190 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 C12orf54Q6X4T0 127 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 BHLHA15Q7RTS1 189 aaPredicted RBP13.1□□□□□ -0.31
USP43-201ENST00000285199 DCAF16Q9NXF7 216 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 TRAV17A0A0B4J275 112 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 IGKV1-39P01597 117 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 IGKV1D-39P04432 117 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 PLP1P60201 277 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 GAL3ST2Q9H3Q3 398 aa13.1□□□□□ -0.31
USP43-201ENST00000285199 RNF115Q9Y4L5 304 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms