RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 KLRD1Q13241 179 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 TMEM249Q2WGJ8 235 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 MMD2Q8IY49 270 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 SSMEM1Q8WWF3 244 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 DPM3Q9P2X0 92 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 ARHGAP32A7KAX9 2087 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 TACC2O95359 2948 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 RNF224P0DH78 156 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 PRR20EP86478 221 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 PRR20CP86479 221 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 PRR20DP86480 221 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 PRR20BP86481 221 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 PRR20AP86496 221 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 GAMTQ14353 236 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 FAM90A2PQ658T7 463 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 RBMS3Q6XE24 437 aaKnown RBP13.34□□□□□ -0.27
CCDC40-201ENST00000269318 STPG3Q8N7X2 389 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 RNF5Q99942 180 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 C20orf24Q9BUV8 137 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 PUS1Q9Y606 427 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC40-201ENST00000269318 IGKV1OR2-108A0A075B7D4 117 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 H3BQ15 152 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 M0R036 132 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 TIMM23O14925 209 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 SNRNP70P08621 437 aaKnown RBP13.34□□□□□ -0.27
CCDC40-201ENST00000269318 AKR1C3P42330 323 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 CEBPGP53567 150 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 B2MP61769 119 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 RAB31Q13636 194 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 RHEBQ15382 184 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 MLANAQ16655 118 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 RPS10P5Q9NQ39 176 aa13.34□□□□□ -0.27
CCDC40-201ENST00000269318 IGLC7A0M8Q6 106 aa13.33□□□□□ -0.28
CCDC40-201ENST00000269318 VENTXO95231 258 aa13.33□□□□□ -0.28
CCDC40-201ENST00000269318 MAS1LP35410 378 aa13.33□□□□□ -0.28
CCDC40-201ENST00000269318 GPX4P36969 197 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-201ENST00000269318 CD81P60033 236 aa13.33□□□□□ -0.28
CCDC40-201ENST00000269318 HABP2Q14520 560 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-201ENST00000269318 AKIRIN2Q53H80 203 aa13.33□□□□□ -0.28
CCDC40-201ENST00000269318 CFHR4Q92496 578 aa13.33□□□□□ -0.28
CCDC40-201ENST00000269318 BPESC1Q9GZL8 116 aa13.33□□□□□ -0.28
CCDC40-201ENST00000269318 SLC45A2Q9UMX9 530 aa13.33□□□□□ -0.28
CCDC40-201ENST00000269318 LINC00869P0C866 280 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 COMPP49747 757 aaPredicted RBP13.32□□□□□ -0.28
CCDC40-201ENST00000269318 LMO4P61968 165 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 MEF2BQ02080 365 aaPredicted RBP13.32□□□□□ -0.28
CCDC40-201ENST00000269318 VMO1Q7Z5L0 202 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 SLC35E3Q7Z769 313 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 LHFPL4Q7Z7J7 247 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 PPP1R27Q86WC6 154 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 RNASEH2CQ8TDP1 164 aaKnown RBP13.32□□□□□ -0.28
CCDC40-201ENST00000269318 GATAD1Q8WUU5 269 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 BBC3Q96PG8 261 aaPredicted RBP13.32□□□□□ -0.28
CCDC40-201ENST00000269318 MANBALQ9NQG1 85 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 SMCO4Q9NRQ5 59 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 METTL1Q9UBP6 276 aaKnown RBP13.32□□□□□ -0.28
CCDC40-201ENST00000269318 A0A1W2PPV4 95 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 IGHV4-39P01824 125 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 TAGLN2P37802 199 aaKnown RBP13.32□□□□□ -0.28
CCDC40-201ENST00000269318 CEACAM3P40198 252 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 TNXAQ16473 311 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 PVRIGQ6DKI7 326 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 SLC16A13Q7RTY0 426 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 SIRPDQ9H106 197 aa13.32□□□□□ -0.28
CCDC40-201ENST00000269318 NDUFS6O75380 124 aaKnown RBP13.31□□□□□ -0.28
CCDC40-201ENST00000269318 STAG3L2P0CL84 134 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 STAG3L3P0CL85 134 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 RPL27AP46776 148 aaKnown RBP13.31□□□□□ -0.28
CCDC40-201ENST00000269318 PSMB3P49720 205 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 SUB1P53999 127 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC40-201ENST00000269318 SSBP2P81877 361 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-201ENST00000269318 FNDC4Q9H6D8 234 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-201ENST00000269318 HILPDAQ9Y5L2 63 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 IGHV2-70DA0A0C4DH43 119 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 LOC105371267A0A1B0GV96 52 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 PRB1P04280 392 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 HOXB4P17483 251 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-201ENST00000269318 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-201ENST00000269318 LCN2P80188 198 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 ZNF114Q8NC26 417 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 ABHD5Q8WTS1 349 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 NIPSNAP3BQ9BS92 247 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 FBXL15Q9H469 300 aa13.31□□□□□ -0.28
CCDC40-201ENST00000269318 ACTL6BO94805 426 aa13.3□□□□□ -0.28
CCDC40-201ENST00000269318 REG1AP05451 166 aa13.3□□□□□ -0.28
CCDC40-201ENST00000269318 PAX6P26367 422 aa13.3□□□□□ -0.28
CCDC40-201ENST00000269318 OR2T6Q8NHC8 308 aa13.3□□□□□ -0.28
CCDC40-201ENST00000269318 TUBA4BQ9H853 241 aa13.3□□□□□ -0.28
CCDC40-201ENST00000269318 SEPSECSQ9HD40 501 aaKnown RBP13.3□□□□□ -0.28
CCDC40-201ENST00000269318 DOPEY1Q5JWR5 2465 aa13.3□□□□□ -0.28
CCDC40-201ENST00000269318 CACNA1BQ00975 2339 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 COLCA2A8K830 154 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 TEX22C9J3V5 150 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 AREGP15514 252 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 OR10J1P30954 320 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 TVP23CQ96ET8 276 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 SLC35E1Q96K37 410 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 A0A1W2PRD5 423 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 A0A1W2PRF3 423 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms