RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ZNF436Q9C0F3 470 aaPredicted RBP9.15□□□□□ -0.94
TRAF4-202ENST00000262396 KLK5Q9Y337 293 aaPredicted RBP9.15□□□□□ -0.94
TRAF4-202ENST00000262396 TSPAN4O14817 238 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 C8orf88P0DMB2 117 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 MFAP4P55083 255 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 CMC4P56277 68 aaPredicted RBP9.14□□□□□ -0.95
TRAF4-202ENST00000262396 PAFAH1B2P68402 229 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 ERHP84090 104 aaKnown RBP9.14□□□□□ -0.95
TRAF4-202ENST00000262396 WT1-ASQ06250 92 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 KLK9Q2XQG4 91 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 DHRS11Q6UWP2 260 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 Q6ZWC4 215 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 SCARB1Q8WTV0 552 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 SLC25A46Q96AG3 418 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 PINX1Q96BK5 328 aaKnown RBP9.14□□□□□ -0.95
TRAF4-202ENST00000262396 NDUFA4L2Q9NRX3 87 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 KLK9Q9UKQ9 250 aa9.14□□□□□ -0.95
TRAF4-202ENST00000262396 GNG7O60262 68 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 CTSDP07339 412 aaPredicted RBP9.13□□□□□ -0.95
TRAF4-202ENST00000262396 PGAM2P15259 253 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 HRH1P35367 487 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 RPL11P62913 178 aaKnown RBP9.13□□□□□ -0.95
TRAF4-202ENST00000262396 KCTD21Q4G0X4 260 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 LYG2Q86SG7 212 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 SNX29P2Q8IUI4 249 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 GALNT14Q96FL9 552 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 ATP6V0BQ99437 205 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 PDCD10Q9BUL8 212 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 COMMD3Q9UBI1 195 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 TP53TG1Q9Y2A0 90 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 STARD9Q9P2P6 4700 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
TRAF4-202ENST00000262396 A0A087WXM4 84 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 IGHV3-49A0A0A0MS15 119 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 C15orf62A8K5M9 175 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 K7EMT4 169 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 DNASE2O00115 360 aaPredicted RBP9.12□□□□□ -0.95
TRAF4-202ENST00000262396 SCGB2A1O75556 95 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 SNCAP37840 140 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 RPS19P39019 145 aaKnown RBP9.12□□□□□ -0.95
TRAF4-202ENST00000262396 TBC1D26Q86UD7 250 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 TMEM116Q8NCL8 245 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 RNASE11Q8TAA1 199 aaKnown RBP9.12□□□□□ -0.95
TRAF4-202ENST00000262396 GINS3Q9BRX5 216 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 CHRDL1Q9BU40 450 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 FXYD6Q9H0Q3 95 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 ENY2Q9NPA8 101 aa9.12□□□□□ -0.95
TRAF4-202ENST00000262396 TRAV14DV4A0A0A6YYC5 116 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 C15orf61A6NNL5 157 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 FAM25AB3EWG3 89 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 FAM25CB3EWG5 89 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 FAM25GB3EWG6 89 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 ATG12O94817 140 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 TGFBR1P36897 503 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 WFDC3Q8IUB2 231 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 CENPSQ8N2Z9 138 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 GBGT1Q8N5D6 347 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 RHPN1-AS1Q9BWJ2 59 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 SMPXQ9UHP9 88 aa9.11□□□□□ -0.95
TRAF4-202ENST00000262396 IGHV3OR16-13A0A075B7E8 117 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 IGHV3-74A0A0B4J1X5 117 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 IGHV7-4-1A0A0J9YVY3 117 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 MPTX1A8MV57 137 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 K7EIM0 57 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 MT-CO2P00403 227 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 IFNA17P01571 189 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 RCVRNP35243 200 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 NPBWR1P48145 328 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 AKR1C2P52895 323 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 TNFRSF9Q07011 255 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 RNASE12Q5GAN4 147 aaKnown RBP9.1□□□□□ -0.95
TRAF4-202ENST00000262396 CEMP1Q6PRD7 247 aaPredicted RBP9.1□□□□□ -0.95
TRAF4-202ENST00000262396 APRG1Q8IVJ8 170 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 SLC35G3Q8N808 338 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 DUSP18Q8NEJ0 188 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 LINC00476Q8WZB0 136 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 MRGPRFQ96AM1 343 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 NARS2Q96I59 477 aaKnown RBP9.1□□□□□ -0.95
TRAF4-202ENST00000262396 LYSTQ99698 3801 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 TXN2Q99757 166 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 SCPEP1Q9HB40 452 aa9.1□□□□□ -0.95
TRAF4-202ENST00000262396 ST8SIA3O43173 380 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 IGHV3-48P01763 117 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 IFNA4P05014 189 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 CD5P06127 495 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 NAT1P18440 290 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 SUB1P53999 127 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRAF4-202ENST00000262396 MFAP2P55001 183 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 TRIM16LQ309B1 348 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 ODF3L2Q3SX64 289 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 MZT2AQ6P582 158 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 RNF183Q96D59 192 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 RNF2Q99496 336 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 CSTL1Q9H114 145 aa9.09□□□□□ -0.95
TRAF4-202ENST00000262396 TMEM231Q9H6L2 316 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms