RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 PLPPR1Q8TBJ4 325 aa15.61■□□□□ 0.09
COL4A3BP-201ENST00000261415 SLC39A9Q9NUM3 307 aa15.61■□□□□ 0.09
COL4A3BP-201ENST00000261415 PPP1R3CQ9UQK1 317 aa15.61■□□□□ 0.09
COL4A3BP-201ENST00000261415 CRYBG3Q68DQ2 2970 aa15.61■□□□□ 0.09
COL4A3BP-201ENST00000261415 PDCD6O75340 191 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 ZNF253O75346 499 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 GOSR1O95249 250 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 CLDN1O95832 211 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 EGR1P18146 543 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 ACP7Q6ZNF0 438 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 GCSAMQ8N6F7 178 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 Q8TCH9 128 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 CHST1O43916 411 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 TMEM50AO95807 157 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 GPX1P07203 203 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 ZNF596Q8TC21 504 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 RSG1Q9BU20 258 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 VSIRQ9H7M9 311 aa15.6■□□□□ 0.09
COL4A3BP-201ENST00000261415 CORTO00230 105 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 PSG1P11464 419 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 CDC34P49427 236 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 PPOXP50336 477 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 ZNF146Q15072 292 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 SPIN3Q5JUX0 258 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 C11orf71Q6IPW1 123 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 BRICD5Q6PL45 260 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 UBTD1Q9HAC8 227 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 TRAV9-1A0A075B6T8 112 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 TRAV34A0A0B4J273 112 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 A1L4Q6 167 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 SLC33A1O00400 549 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 MPPED1O15442 326 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 LHBP01229 141 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 REG1AP05451 166 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 TCF24Q7RTU0 167 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 DTX2Q86UW9 622 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 RNF7Q9UBF6 113 aa15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 UBE2J1Q9Y385 318 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-201ENST00000261415 WNT2P09544 360 aa15.58■□□□□ 0.08
COL4A3BP-201ENST00000261415 PET117Q6UWS5 81 aa15.58■□□□□ 0.08
COL4A3BP-201ENST00000261415 OR11L1Q8NGX0 322 aa15.58■□□□□ 0.08
COL4A3BP-201ENST00000261415 OR4F5Q8NH21 305 aa15.58■□□□□ 0.08
COL4A3BP-201ENST00000261415 OR4F4Q96R69 305 aa15.58■□□□□ 0.08
COL4A3BP-201ENST00000261415 ADAM20O43506 726 aa15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 OR4A47Q6IF82 309 aa15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 Q6P435 159 aa15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 NEIL1Q96FI4 390 aaPredicted RBP15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 MEGF9Q9H1U4 602 aa15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 AKAP6Q13023 2319 aa15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 HERV-K104P61576 105 aa15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 PMCHL1Q16048 86 aa15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 CHODLQ9H9P2 273 aa15.57■□□□□ 0.08
COL4A3BP-201ENST00000261415 TRAV24A0A0B4J272 114 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 OR2H2O95918 312 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 CEBPDP49716 269 aaPredicted RBP15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 OR52L2PQ8NGH6 319 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 SGMS2Q8NHU3 365 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 CLUHP3Q96NS8 147 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 USP9YO00507 2555 aaPredicted RBP15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 DSCAML1Q8TD84 2053 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 HSPB6O14558 160 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 SH2D1BO14796 132 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 DEGS1O15121 323 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 HAND1O96004 215 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 VDAC1P21796 283 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 PAX9P55771 341 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 FAM201AQ5SY85 155 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 FAM71F2Q6NXP2 309 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 FAM90A1Q86YD7 464 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 SELENOHQ8IZQ5 122 aaKnown RBP15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 OR4S2Q8NH73 311 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 HDHD3Q9BSH5 251 aaPredicted RBP15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 NRN1Q9NPD7 142 aa15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 HELZ2Q9BYK8 2649 aaKnown RBP15.56■□□□□ 0.08
COL4A3BP-201ENST00000261415 SIRPB1O00241 398 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 TMPRSS2O15393 492 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 RAMP3O60896 148 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 PRRX1P54821 245 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 LRRC75BQ2VPJ9 315 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 KIAA2026Q5HYC2 2103 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 PRSS57Q6UWY2 283 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 RDH5Q92781 318 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 RAB40CQ96S21 281 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 TBL2Q9Y4P3 447 aaKnown RBP15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 DOPEY2Q9Y3R5 2298 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 SAA2-SAA4A0A096LPE2 208 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 GAGE12BA1L429 117 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 A6NJY4 79 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 LRRC30A6NM36 301 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 J3QR06 171 aa15.55■□□□□ 0.08
COL4A3BP-201ENST00000261415 IGHV3OR15-7A0A075B7D8 119 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 GNRHRP30968 328 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 NMSQ5H8A3 153 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 TCF23Q7RTU1 214 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 FAM103A1Q9BTL3 118 aaKnown RBP15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 MRPL18Q9H0U6 180 aaKnown RBP15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 USF3Q68DE3 2245 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 PIGBOS1A0A0B4J2F0 54 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 TFF1P04155 84 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms