RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ST20Q9HBF5 79 aa16.48■□□□□ 0.23
HOXC13-201ENST00000243056 V9GYV3 84 aa16.48■□□□□ 0.23
HOXC13-201ENST00000243056 PRR14LQ5THK1 2151 aa16.48■□□□□ 0.23
HOXC13-201ENST00000243056 A0A087X0K7 114 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 PDCD6O75340 191 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 PRSS12P56730 875 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 SLC25A34Q6PIV7 304 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 SCCPDHQ8NBX0 429 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 TRIB1Q96RU8 372 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 IGHG3P01860 377 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 GCSAMLQ5JQS6 135 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 OSR2Q8N2R0 312 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 RPRMLQ8N4K4 120 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 C18orf32Q8TCD1 76 aa16.47■□□□□ 0.23
HOXC13-201ENST00000243056 B4GALT1P15291 398 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 TMPRSS3P57727 454 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 GRB2P62993 217 aaKnown RBP16.46■□□□□ 0.23
HOXC13-201ENST00000243056 MALLQ13021 153 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 DAZAP2Q15038 168 aaPredicted RBP16.46■□□□□ 0.23
HOXC13-201ENST00000243056 TMEM14EPQ6UXP3 125 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 Q8NA96 180 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 TMEM54Q969K7 222 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 COMMD5Q9GZQ3 224 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 DKK4Q9UBT3 224 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 TRAV38-1A0A0B4J264 116 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 OR4C46A6NHA9 309 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 M0R2Z0 102 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 DNPH1O43598 174 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 IGKV1-5P01602 117 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 GUCA1AP43080 201 aaPredicted RBP16.46■□□□□ 0.23
HOXC13-201ENST00000243056 FOXE3Q13461 319 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 NPCDR1Q9BY65 106 aa16.46■□□□□ 0.23
HOXC13-201ENST00000243056 LRP5LA4QPB2 252 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 DHHO43323 396 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 MRPL33O75394 65 aaKnown RBP16.45■□□□□ 0.22
HOXC13-201ENST00000243056 TUSC2O75896 110 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 CEACAM16Q2WEN9 425 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 GTF2H5Q6ZYL4 71 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 OR4A5Q8NH83 315 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 CX3CL1P78423 397 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 GABRA6Q16445 453 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 OR1F12Q8NHA8 337 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 FGFBP3Q8TAT2 258 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 PPP1R3CQ9UQK1 317 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 ARL2-SNX15V9GYD0 113 aa16.45■□□□□ 0.22
HOXC13-201ENST00000243056 IGKV1-6A0A0C4DH72 117 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 TRAPPC2LH3BP13 241 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 RPS16P62249 146 aaKnown RBP16.44■□□□□ 0.22
HOXC13-201ENST00000243056 SIGMAR1Q99720 223 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 A0A096LPE4 126 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 A0A1W2PPZ6 126 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 K7EP34 96 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 CLDN14O95500 239 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 PPOXP50336 477 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 NABP1Q96AH0 204 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 TMEM147Q9BVK8 224 aa16.44■□□□□ 0.22
HOXC13-201ENST00000243056 HSBP1O75506 76 aa16.43■□□□□ 0.22
HOXC13-201ENST00000243056 TCL1AP56279 114 aa16.43■□□□□ 0.22
HOXC13-201ENST00000243056 BHLHA15Q7RTS1 189 aaPredicted RBP16.43■□□□□ 0.22
HOXC13-201ENST00000243056 NAA38Q9BRA0 125 aaKnown RBP16.43■□□□□ 0.22
HOXC13-201ENST00000243056 ZNF835Q9Y2P0 537 aa16.43■□□□□ 0.22
HOXC13-201ENST00000243056 COL12A1Q99715 3063 aa16.43■□□□□ 0.22
HOXC13-201ENST00000243056 AGFG2O95081 481 aa16.43■□□□□ 0.22
HOXC13-201ENST00000243056 CLDN1O95832 211 aa16.43■□□□□ 0.22
HOXC13-201ENST00000243056 MRPL54Q6P161 138 aaKnown RBP16.43■□□□□ 0.22
HOXC13-201ENST00000243056 FAM222BQ8WU58 562 aa16.43■□□□□ 0.22
HOXC13-201ENST00000243056 NPFFR1Q9GZQ6 430 aa16.43■□□□□ 0.22
HOXC13-201ENST00000243056 INTS1Q8N201 2190 aaKnown RBP16.42■□□□□ 0.22
HOXC13-201ENST00000243056 CKS1BP61024 79 aa16.42■□□□□ 0.22
HOXC13-201ENST00000243056 FOXF2Q12947 444 aa16.42■□□□□ 0.22
HOXC13-201ENST00000243056 RSPO1Q2MKA7 263 aaPredicted RBP16.42■□□□□ 0.22
HOXC13-201ENST00000243056 TECRQ9NZ01 308 aaKnown RBP16.42■□□□□ 0.22
HOXC13-201ENST00000243056 OR7C1O76099 320 aaPredicted RBP16.41■□□□□ 0.22
HOXC13-201ENST00000243056 PLP1P60201 277 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 Q6ZSR3 168 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 C9orf106Q8NAJ2 232 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 PRDM14Q9GZV8 571 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 SCRT2Q9NQ03 307 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 AMY1AP04745 511 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 STAG3L3P0CL85 134 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 CRYBB3P26998 211 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 HIST1H1AQ02539 215 aaPredicted RBP16.41■□□□□ 0.22
HOXC13-201ENST00000243056 SLAQ13239 276 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 PET117Q6UWS5 81 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 OR2AE1Q8NHA4 323 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 FAM216AQ8WUB2 273 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 LSM10Q969L4 123 aaKnown RBP16.41■□□□□ 0.22
HOXC13-201ENST00000243056 ATP23Q9Y6H3 246 aa16.41■□□□□ 0.22
HOXC13-201ENST00000243056 IGKV3D-15A0A087WSY6 115 aa16.4■□□□□ 0.22
HOXC13-201ENST00000243056 RBM11P57052 281 aaKnown RBP16.4■□□□□ 0.22
HOXC13-201ENST00000243056 C10orf128Q5T292 105 aa16.4■□□□□ 0.22
HOXC13-201ENST00000243056 CNEP1R1Q8N9A8 125 aa16.4■□□□□ 0.22
HOXC13-201ENST00000243056 HLA-DQA1P01909 254 aa16.4■□□□□ 0.22
HOXC13-201ENST00000243056 APCSP02743 223 aa16.4■□□□□ 0.22
HOXC13-201ENST00000243056 TMEM45BQ96B21 275 aa16.4■□□□□ 0.22
HOXC13-201ENST00000243056 EAF1Q96JC9 268 aaPredicted RBP16.4■□□□□ 0.22
HOXC13-201ENST00000243056 TMEM70Q9BUB7 260 aa16.4■□□□□ 0.22
HOXC13-201ENST00000243056 ZFYVE26Q68DK2 2539 aa16.4■□□□□ 0.22
HOXC13-201ENST00000243056 SMIM17P0DL12 118 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 CLCF1Q9UBD9 225 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms