RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 RTL8BQ17RB0 113 aa13.09□□□□□ -0.31
PXN-201ENST00000228307 TMEM45BQ96B21 275 aa13.09□□□□□ -0.31
PXN-201ENST00000228307 WASHC3Q9Y3C0 194 aa13.09□□□□□ -0.31
PXN-201ENST00000228307 APELAP0DMC3 54 aa13.09□□□□□ -0.31
PXN-201ENST00000228307 TREML4Q6UXN2 200 aa13.09□□□□□ -0.31
PXN-201ENST00000228307 GNB4Q9HAV0 340 aa13.09□□□□□ -0.31
PXN-201ENST00000228307 ZNF355PQ9NSJ1 428 aa13.09□□□□□ -0.31
PXN-201ENST00000228307 YLPM1P49750 1951 aaKnown RBP13.09□□□□□ -0.31
PXN-201ENST00000228307 SLC25A5P05141 298 aaKnown RBP13.08□□□□□ -0.31
PXN-201ENST00000228307 Q6P435 159 aa13.08□□□□□ -0.31
PXN-201ENST00000228307 MOGAT3Q86VF5 341 aa13.08□□□□□ -0.31
PXN-201ENST00000228307 NABP2Q9BQ15 211 aa13.08□□□□□ -0.31
PXN-201ENST00000228307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.08□□□□□ -0.319e-8■■■□□ 18.3
PXN-201ENST00000228307 TRGV10A0A0A0MS01 117 aa13.08□□□□□ -0.32
PXN-201ENST00000228307 CD99P14209 185 aa13.08□□□□□ -0.32
PXN-201ENST00000228307 MPV17P39210 176 aa13.08□□□□□ -0.32
PXN-201ENST00000228307 TCTAP57738 103 aa13.08□□□□□ -0.32
PXN-201ENST00000228307 COLCA1Q6ZS62 124 aa13.08□□□□□ -0.32
PXN-201ENST00000228307 ZNF738Q8NE65 137 aa13.08□□□□□ -0.32
PXN-201ENST00000228307 DCHS1Q96JQ0 3298 aa13.08□□□□□ -0.32
PXN-201ENST00000228307 MT-ND6P03923 174 aa13.08□□□□□ -0.32
PXN-201ENST00000228307 FOXH1O75593 365 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 CA2P00918 260 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 FOXA3P55318 350 aaPredicted RBP13.07□□□□□ -0.32
PXN-201ENST00000228307 LCN12Q6JVE5 192 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 Q6ZWC4 215 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 EAF1Q96JC9 268 aaPredicted RBP13.07□□□□□ -0.32
PXN-201ENST00000228307 LPAR2Q9HBW0 351 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 ZNF292O60281 2723 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 ZNF891A8MT65 544 aaPredicted RBP13.07□□□□□ -0.32
PXN-201ENST00000228307 NPPCP23582 126 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 REG1BP48304 166 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 LAMTOR2Q9Y2Q5 125 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 DMXL2Q8TDJ6 3036 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 GPR6P46095 362 aaPredicted RBP13.07□□□□□ -0.32
PXN-201ENST00000228307 COTL1Q14019 142 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 OR51B2Q9Y5P1 312 aa13.07□□□□□ -0.32
PXN-201ENST00000228307 TRAV3A0A0B4J244 114 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 C15orf62A8K5M9 175 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 SMPD2O60906 423 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 HLA-DQA1P01909 254 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 FAM214BQ7L5A3 538 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 RPRMLQ8N4K4 120 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 OR2T6Q8NHC8 308 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 PYGO2Q9BRQ0 406 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 GGTLC1Q9BX51 225 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 DCAF16Q9NXF7 216 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 ANKHD1Q8IWZ3 2542 aaKnown RBP13.06□□□□□ -0.32
PXN-201ENST00000228307 COL4A2P08572 1712 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 EFNB3Q15768 340 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 SLC35E4Q6ICL7 350 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 YTHDF2Q9Y5A9 579 aaKnown RBP13.06□□□□□ -0.32
PXN-201ENST00000228307 F2Z2F3 143 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 PLGLAQ15195 96 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 NRN1LQ496H8 165 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 C9orf106Q8NAJ2 232 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 RNF138Q8WVD3 245 aa13.06□□□□□ -0.32
PXN-201ENST00000228307 TMEM210A6NLX4 147 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 ACSF3Q4G176 576 aaPredicted RBP13.05□□□□□ -0.32
PXN-201ENST00000228307 NEU1Q99519 415 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 H3BTX0 84 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 STAG3L2P0CL84 134 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 STAG3L3P0CL85 134 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 HSPE1P61604 102 aaKnown RBP13.05□□□□□ -0.32
PXN-201ENST00000228307 COA6Q5JTJ3 125 aaKnown RBP13.05□□□□□ -0.32
PXN-201ENST00000228307 ZNF295-AS1Q8N0V1 137 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 TRGV8A0A0C4DH27 118 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 GABRA6Q16445 453 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 ASPHD1Q5U4P2 390 aa13.05□□□□□ -0.32
PXN-201ENST00000228307 SSBP4Q9BWG4 385 aaPredicted RBP13.05□□□□□ -0.32
PXN-201ENST00000228307 LEMD1Q68G75 181 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 ACP7Q6ZNF0 438 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 Q6ZSR3 168 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 MGST2Q99735 147 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 AKAP13Q12802 2813 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 TNFSF4P23510 183 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 UNQ5815/PRO19632Q6UWF5 114 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 OR10X1Q8NGY0 326 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 HES4Q9HCC6 221 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 TYMSP04818 313 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 MYOD1P15172 320 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 GFRALQ6UXV0 394 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 BCL2L2Q92843 193 aaPredicted RBP13.04□□□□□ -0.32
PXN-201ENST00000228307 OR8B2Q96RD0 313 aa13.04□□□□□ -0.32
PXN-201ENST00000228307 TRBV6-6A0A0A6YYG2 114 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 K7EM74 188 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 LINC00869P0C866 280 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 BPIFB3P59826 476 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 COX19Q49B96 90 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 SCNM1Q9BWG6 230 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 AMY1AP04745 511 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 FAM87AP0C7U9 286 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 IGHV1-2P23083 117 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 IL18BPO95998 194 aa13.03□□□□□ -0.32
PXN-201ENST00000228307 ZCCHC24Q8N2G6 241 aaKnown RBP13.03□□□□□ -0.32
PXN-201ENST00000228307 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.32
PXN-201ENST00000228307 DUTP33316 252 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms