RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 FOXJ2Q9P0K8 574 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 NEUROG3Q9Y4Z2 214 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BKO60814 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 ZG16O60844 167 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 ZNF324O75467 553 aaPredicted RBP3.74□□□□□ -1.81
CHD9-201ENST00000219084 C1QL1O75973 258 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 THY1P04216 161 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BJP06899 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 IL6RP08887 468 aaPredicted RBP3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BOP23527 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BBP33778 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BDP58876 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BCP62807 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 CX3CL1P78423 397 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST2H2BEQ16778 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.74□□□□□ -1.81
CHD9-201ENST00000219084 LY6G6FQ5SQ64 297 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 ZNF525Q8N782 197 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BHQ93079 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BNQ99877 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H2BMQ99879 126 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 FOXA2Q9Y261 457 aaPredicted RBP3.74□□□□□ -1.81
CHD9-201ENST00000219084 R4GN57 208 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 CPAMD8Q8IZJ3 1885 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 C7orf71A4D174 169 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 C4orf51C9J302 202 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 HINT1P49773 126 aaPredicted RBP3.74□□□□□ -1.81
CHD9-201ENST00000219084 ORMDL2Q53FV1 153 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 ACTL10Q5JWF8 245 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 C9orf50Q5SZB4 431 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 MRPL27Q9P0M9 148 aaKnown RBP3.74□□□□□ -1.81
CHD9-201ENST00000219084 MOB4Q9Y3A3 225 aa3.74□□□□□ -1.81
CHD9-201ENST00000219084 TRAV39A0A0B4J263 110 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 PGPA6NDG6 321 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 DMRTA1Q5VZB9 504 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 GDF15Q99988 308 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 GFRA4Q9GZZ7 299 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 SLC17A3O00476 420 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 TMPRSS3P57727 454 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 LOC389332A0A1B0GUA5 103 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 CRYBB3P26998 211 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 LHFPL1Q86WI0 220 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 ORAOV1Q8WV07 137 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 SRXN1Q9BYN0 137 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 CBLN4Q9NTU7 201 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 ZNF205O95201 554 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 SCGB1A1P11684 91 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 CFHR1Q03591 330 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 DMRTC1Q5HYR2 192 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 FAM219BQ5XKK7 198 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 CFAP161Q6P656 301 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 DTX1Q86Y01 620 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 PRR7Q8TB68 274 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 FAM57AQ8TBR7 257 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 RNF5Q99942 180 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 RTN4RQ9BZR6 473 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 FSCN3Q9NQT6 498 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 RNF115Q9Y4L5 304 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 LDLRAD4O15165 306 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 CBLN1P23435 193 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 UQCRFS1P47985 274 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 RND2P52198 227 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 RHOGP84095 191 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 ZNF362Q5T0B9 420 aaPredicted RBP3.73□□□□□ -1.81
CHD9-201ENST00000219084 C16orf47Q6ZP98 133 aaPredicted RBP3.73□□□□□ -1.81
CHD9-201ENST00000219084 ZNF502Q8TBZ5 544 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 NEU4Q8WWR8 484 aaPredicted RBP3.73□□□□□ -1.81
CHD9-201ENST00000219084 RAX2Q96IS3 184 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 OPN3Q9H1Y3 402 aaPredicted RBP3.73□□□□□ -1.81
CHD9-201ENST00000219084 IGKV3D-15A0A087WSY6 115 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 LOC107984156A0A0G2JMH3 177 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 FOXH1O75593 365 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 C1QTNF9P0C862 333 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 IL9P15248 144 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 ERVK11-1P61568 191 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 RRN3P1Q2M238 152 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 C2orf83Q53S99 150 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 ZNF600Q6ZNG1 722 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 ARL17AQ8IVW1 177 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 ARHGAP21Q5T5U3 1957 aa3.73□□□□□ -1.81
CHD9-201ENST00000219084 IGHV3OR15-7A0A075B7D8 119 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 A0A1W2PP11 408 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 TNFSF13O75888 250 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 NBEAP1P0C6P0 100 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 NPPCP23582 126 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 CD40P25942 277 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 PCP4P48539 62 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 ZNF137PP52743 207 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 GAS1P54826 345 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 Q5BKY6 102 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 CLEC2AQ6UVW9 174 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 LYPD1Q8N2G4 141 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 SRSF12Q8WXF0 261 aaKnown RBP3.72□□□□□ -1.81
CHD9-201ENST00000219084 WFDC6Q9BQY6 131 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 NOTCH4Q99466 2003 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 A0A1W2PR80 420 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 TCRBV4S1A1TA0A5B7 111 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.72□□□□□ -1.81
CHD9-201ENST00000219084 ADRA2AP08913 450 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 RPL23P62829 140 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms