RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 TCF15Q12870 199 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 RNF151Q2KHN1 245 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 C19orf54Q5BKX5 351 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 PDZD11Q5EBL8 140 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 IBA57Q5T440 356 aaKnown RBP3.53□□□□□ -1.84
CFTR-201ENST00000003084 ZNF324BQ6AW86 544 aaPredicted RBP3.53□□□□□ -1.84
CFTR-201ENST00000003084 FAM159AQ6UWV7 190 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 OR52E5Q8NH55 327 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 TMEM37Q8WXS4 190 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 VWA8A3KMH1 1905 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 NPFFO15130 113 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 GCGP01275 180 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 SAA1P0DJI8 122 aaPredicted RBP3.53□□□□□ -1.84
CFTR-201ENST00000003084 ARL14EPLP0DKL9 152 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 AGAP20933 346 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 CEACAM8P31997 349 aaPredicted RBP3.53□□□□□ -1.84
CFTR-201ENST00000003084 FAM3BP58499 235 aaPredicted RBP3.53□□□□□ -1.84
CFTR-201ENST00000003084 ELOBQ15370 118 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 TMEM183BQ1AE95 376 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 SMUG1Q53HV7 270 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 LEMD1Q68G75 181 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 CLEC19AQ6UXS0 136 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 FGFBP3Q8TAT2 258 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 Q8TCH9 128 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 SCRT2Q9NQ03 307 aa3.53□□□□□ -1.84
CFTR-201ENST00000003084 FOXA2Q9Y261 457 aaPredicted RBP3.53□□□□□ -1.84
CFTR-201ENST00000003084 TRBV9A0A0B4J1U6 114 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 HLA-DRB1P01911 266 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 IGHV1-8P0DP01 117 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 HIST1H1AQ02539 215 aaPredicted RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 MAJINQ3KP22 176 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 TMEM200BQ69YZ2 307 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 GTSCR1Q86UQ5 136 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 GAFA1Q96PS6 74 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 RTBDNQ9BSG5 229 aaPredicted RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 RSG1Q9BU20 258 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 GREB1Q4ZG55 1949 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 KIAA1671Q9BY89 1806 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 TRAV41A0A0B4J266 112 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 A0A1B0GW15 77 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 TCAPO15273 167 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 OR9G9P0C7N8 305 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 GCHFRP30047 84 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 ERVK11-1P61568 191 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 ZNF474Q6S9Z5 364 aaPredicted RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 LRP11Q86VZ4 500 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 Q8N3U1 123 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 C11orf42Q8N5U0 333 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 PNRC2Q9NPJ4 139 aaKnown RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 RPRMQ9NS64 109 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 IGKV3D-20A0A0C4DH25 116 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 PSMB11A5LHX3 300 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 OR4C46A6NHA9 309 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 FAM223BA6NKX1 122 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 IGKV3-15P01624 115 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 TDGF1P13385 188 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 CCL3L1P16619 93 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 ASIPP42127 132 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 ZNF600Q6ZNG1 722 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 FAM223AQ8IWN6 122 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 OR10S1Q8NGN2 331 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 C8orf46Q8TAG6 207 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 NEUROG1Q92886 237 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 SRSF8Q9BRL6 282 aaKnown RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 NPCDR1Q9BY65 106 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 SDF2L1Q9HCN8 221 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 OTORQ9NRC9 128 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 IGHV3OR16-12A0A075B7B8 117 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 TRAV40A0A0B4J280 105 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 SNURFLB1AK76 121 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 DANCRP0C864 163 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 CXCL2P19875 107 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 HNRNPA3P51991 378 aaKnown RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 TCL1AP56279 114 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 PRCDQ00LT1 54 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 MEF2BQ02080 365 aaPredicted RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 SRSF6Q13247 344 aaKnown RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 EFNB3Q15768 340 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 ZNF660Q6AZW8 331 aaPredicted RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 HEPN1Q6WQI6 88 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 MAP1LC3AQ9H492 121 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 ELF5Q9UKW6 265 aaPredicted RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 A0A0B4J293 547 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 ZNF253O75346 499 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 GPR183P32249 361 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 EFNB1P98172 346 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 TMEM42Q69YG0 159 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 MRPL54Q6P161 138 aaKnown RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 LHFPL5Q8TAF8 219 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 NCOR1P1Q9H4R4 102 aa3.52□□□□□ -1.85
CFTR-201ENST00000003084 RPUSD1Q9UJJ7 312 aaKnown RBP3.52□□□□□ -1.85
CFTR-201ENST00000003084 TMSB15BA0A087X1C1 80 aa3.51□□□□□ -1.85
CFTR-201ENST00000003084 IGKV1-9A0A0C4DH69 117 aa3.51□□□□□ -1.85
CFTR-201ENST00000003084 MSGN1A6NI15 193 aa3.51□□□□□ -1.85
CFTR-201ENST00000003084 NDUFB4O95168 129 aa3.51□□□□□ -1.85
CFTR-201ENST00000003084 SCGB1C2P0DMR2 95 aa3.51□□□□□ -1.85
CFTR-201ENST00000003084 IER3P46695 156 aa3.51□□□□□ -1.85
CFTR-201ENST00000003084 RUNX1Q01196 453 aa3.51□□□□□ -1.85
CFTR-201ENST00000003084 SLC25A48Q6ZT89 311 aaKnown RBP3.51□□□□□ -1.85
CFTR-201ENST00000003084 USMG5Q96IX5 58 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms